Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC12.04□□□□□ -0.48
RAB5BP61020 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.04□□□□□ -0.48
RAB5BP61020 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 AC004263.2-201ENST00000617183 678 ntBASIC12.04□□□□□ -0.48
RAB5BP61020 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.04□□□□□ -0.48
RAB5BP61020 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 AC055811.4-201ENST00000624039 1754 ntBASIC12.04□□□□□ -0.48
RAB5BP61020 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RAB5BP61020 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC12.04□□□□□ -0.48
RAB5BP61020 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 AC010336.1-201ENST00000539278 4739 ntBASIC12.04□□□□□ -0.48
RAB5BP61020 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
RAB5BP61020 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RAB5BP61020 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB5BP61020 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RAB5BP61020 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.04□□□□□ -0.48
RAB5BP61020 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC12.04□□□□□ -0.48
RAB5BP61020 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RAB5BP61020 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 AC023794.5-201ENST00000564380 2157 ntBASIC12.03□□□□□ -0.48
RAB5BP61020 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.03□□□□□ -0.48
RAB5BP61020 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.03□□□□□ -0.48
RAB5BP61020 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB5BP61020 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB5BP61020 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB5BP61020 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
RAB5BP61020 HLA-F-220ENST00000434407 884 ntBASIC12.03□□□□□ -0.48
RAB5BP61020 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB5BP61020 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB5BP61020 AC116562.2-201ENST00000507042 360 ntBASIC12.03□□□□□ -0.48
RAB5BP61020 STK19B-204ENST00000512515 211 ntBASIC12.03□□□□□ -0.48
RAB5BP61020 NUDT16P1-203ENST00000513809 620 ntBASIC12.03□□□□□ -0.48
RAB5BP61020 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.03□□□□□ -0.48
RAB5BP61020 AC104771.1-201ENST00000603335 964 ntBASIC12.03□□□□□ -0.48
RAB5BP61020 AC022400.8-201ENST00000623453 3599 ntBASIC12.03□□□□□ -0.48
RAB5BP61020 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 AC018529.2-202ENST00000611482 3087 ntBASIC12.03□□□□□ -0.48
RAB5BP61020 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.03□□□□□ -0.48
RAB5BP61020 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.03□□□□□ -0.48
RAB5BP61020 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 AC016397.2-201ENST00000624848 1985 ntBASIC12.03□□□□□ -0.48
RAB5BP61020 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
RAB5BP61020 AC099521.2-201ENST00000619354 2036 ntBASIC12.03□□□□□ -0.48
RAB5BP61020 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.03□□□□□ -0.48
RAB5BP61020 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
RAB5BP61020 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RAB5BP61020 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.02□□□□□ -0.48
RAB5BP61020 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
RAB5BP61020 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
RAB5BP61020 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RAB5BP61020 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
RAB5BP61020 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB5BP61020 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB5BP61020 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB5BP61020 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
RAB5BP61020 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RAB5BP61020 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RAB5BP61020 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RAB5BP61020 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
RAB5BP61020 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
RAB5BP61020 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RAB5BP61020 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB5BP61020 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.02□□□□□ -0.49
RAB5BP61020 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.02□□□□□ -0.49
RAB5BP61020 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RAB5BP61020 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.02□□□□□ -0.49
RAB5BP61020 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms