Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH4P55283 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH4P55283 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH4P55283 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH4P55283 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH4P55283 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH4P55283 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH4P55283 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH4P55283 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH4P55283 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH4P55283 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH4P55283 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CDH4P55283 ARSEP1-201ENST00000420443 635 ntBASIC15.66■□□□□ 0.1
CDH4P55283 C2orf27AP3-201ENST00000434123 579 ntBASIC15.66■□□□□ 0.1
CDH4P55283 AC016694.1-201ENST00000434179 700 ntBASIC15.66■□□□□ 0.1
CDH4P55283 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.66■□□□□ 0.1
CDH4P55283 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDH4P55283 FTH1P14-201ENST00000482930 551 ntBASIC15.66■□□□□ 0.1
CDH4P55283 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH4P55283 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.66■□□□□ 0.1
CDH4P55283 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH4P55283 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH4P55283 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDH4P55283 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH4P55283 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH4P55283 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CDH4P55283 AL354718.3-201ENST00000616414 581 ntBASIC15.66■□□□□ 0.1
CDH4P55283 CR382287.1-201ENST00000623954 586 ntBASIC15.66■□□□□ 0.1
CDH4P55283 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH4P55283 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH4P55283 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH4P55283 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH4P55283 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH4P55283 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDH4P55283 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH4P55283 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH4P55283 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH4P55283 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH4P55283 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH4P55283 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH4P55283 REXO1L5P-201ENST00000622260 2098 ntBASIC15.66■□□□□ 0.1
CDH4P55283 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH4P55283 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH4P55283 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH4P55283 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
CDH4P55283 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH4P55283 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH4P55283 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH4P55283 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH4P55283 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH4P55283 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH4P55283 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH4P55283 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH4P55283 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH4P55283 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH4P55283 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH4P55283 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CDH4P55283 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH4P55283 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH4P55283 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH4P55283 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDH4P55283 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH4P55283 AL138709.1-201ENST00000614840 1693 ntBASIC15.65■□□□□ 0.1
CDH4P55283 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CDH4P55283 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CDH4P55283 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH4P55283 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH4P55283 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH4P55283 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CDH4P55283 AC007551.1-201ENST00000457394 519 ntBASIC15.65■□□□□ 0.1
CDH4P55283 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH4P55283 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH4P55283 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH4P55283 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDH4P55283 AC025279.2-201ENST00000569730 653 ntBASIC15.65■□□□□ 0.1
CDH4P55283 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH4P55283 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CDH4P55283 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH4P55283 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH4P55283 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH4P55283 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH4P55283 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH4P55283 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH4P55283 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDH4P55283 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH4P55283 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH4P55283 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH4P55283 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CDH4P55283 MST1L-201ENST00000442552 2185 ntBASIC15.65■□□□□ 0.1
CDH4P55283 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDH4P55283 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDH4P55283 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH4P55283 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDH4P55283 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CDH4P55283 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH4P55283 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH4P55283 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CDH4P55283 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH4P55283 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms