Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.8■□□□□ 0.28
CLCN3P51790 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN3P51790 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
CLCN3P51790 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCN3P51790 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLCN3P51790 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCN3P51790 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN3P51790 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN3P51790 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLCN3P51790 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN3P51790 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN3P51790 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCN3P51790 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCN3P51790 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN3P51790 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN3P51790 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN3P51790 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN3P51790 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CLCN3P51790 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN3P51790 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN3P51790 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLCN3P51790 AL360270.3-201ENST00000609118 1348 ntBASIC16.79■□□□□ 0.28
CLCN3P51790 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN3P51790 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN3P51790 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CLCN3P51790 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN3P51790 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.79■□□□□ 0.28
CLCN3P51790 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN3P51790 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN3P51790 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN3P51790 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLCN3P51790 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCN3P51790 GOLGA2P4-201ENST00000441462 777 ntBASIC16.79■□□□□ 0.28
CLCN3P51790 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCN3P51790 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCN3P51790 AC091271.1-201ENST00000611877 1162 ntBASIC16.79■□□□□ 0.28
CLCN3P51790 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN3P51790 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLCN3P51790 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN3P51790 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN3P51790 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCN3P51790 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN3P51790 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN3P51790 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN3P51790 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN3P51790 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN3P51790 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN3P51790 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN3P51790 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN3P51790 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN3P51790 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCN3P51790 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCN3P51790 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCN3P51790 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCN3P51790 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CLCN3P51790 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.78■□□□□ 0.28
CLCN3P51790 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CLCN3P51790 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.78■□□□□ 0.28
CLCN3P51790 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CLCN3P51790 CNN2P10-201ENST00000443067 918 ntBASIC16.78■□□□□ 0.28
CLCN3P51790 Z93015.1-201ENST00000451718 390 ntBASIC16.78■□□□□ 0.28
CLCN3P51790 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.78■□□□□ 0.28
CLCN3P51790 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.78■□□□□ 0.28
CLCN3P51790 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.78■□□□□ 0.28
CLCN3P51790 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.78■□□□□ 0.28
CLCN3P51790 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCN3P51790 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.78■□□□□ 0.28
CLCN3P51790 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.78■□□□□ 0.28
CLCN3P51790 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 C18orf15-201ENST00000623680 2534 ntBASIC16.78■□□□□ 0.28
CLCN3P51790 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCN3P51790 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.78■□□□□ 0.28
CLCN3P51790 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLCN3P51790 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCN3P51790 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN3P51790 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN3P51790 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN3P51790 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 311.9 ms