Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.03■□□□□ 0.16
MMP13P45452 AC004461.2-201ENST00000629517 803 ntBASIC16.03■□□□□ 0.16
MMP13P45452 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.03■□□□□ 0.16
MMP13P45452 AF228730.6-201ENST00000641497 218 ntBASIC16.03■□□□□ 0.16
MMP13P45452 AC084121.3-201ENST00000641716 218 ntBASIC16.03■□□□□ 0.16
MMP13P45452 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MMP13P45452 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.03■□□□□ 0.16
MMP13P45452 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
MMP13P45452 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.02■□□□□ 0.16
MMP13P45452 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP13P45452 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP13P45452 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MMP13P45452 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MMP13P45452 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP13P45452 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
MMP13P45452 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.02■□□□□ 0.16
MMP13P45452 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MMP13P45452 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP13P45452 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
MMP13P45452 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP13P45452 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP13P45452 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.02■□□□□ 0.16
MMP13P45452 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.02■□□□□ 0.16
MMP13P45452 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP13P45452 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MMP13P45452 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MMP13P45452 MRPS18AP1-201ENST00000414458 589 ntBASIC16.02■□□□□ 0.16
MMP13P45452 AC015922.1-201ENST00000421102 1152 ntBASIC16.02■□□□□ 0.16
MMP13P45452 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
MMP13P45452 KRT18P64-201ENST00000434946 1219 ntBASIC16.02■□□□□ 0.16
MMP13P45452 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.02■□□□□ 0.16
MMP13P45452 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.02■□□□□ 0.16
MMP13P45452 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.02■□□□□ 0.16
MMP13P45452 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.02■□□□□ 0.16
MMP13P45452 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MMP13P45452 AC135586.1-201ENST00000539323 574 ntBASIC16.02■□□□□ 0.16
MMP13P45452 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
MMP13P45452 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.02■□□□□ 0.16
MMP13P45452 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.02■□□□□ 0.16
MMP13P45452 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
MMP13P45452 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP13P45452 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MMP13P45452 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP13P45452 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP13P45452 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
MMP13P45452 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP13P45452 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.02■□□□□ 0.15
MMP13P45452 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
MMP13P45452 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.02■□□□□ 0.15
MMP13P45452 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP13P45452 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.02■□□□□ 0.15
MMP13P45452 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
MMP13P45452 AC006504.5-208ENST00000588784 2401 ntBASIC16.02■□□□□ 0.15
MMP13P45452 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.01■□□□□ 0.15
MMP13P45452 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP13P45452 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP13P45452 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP13P45452 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.01■□□□□ 0.15
MMP13P45452 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP13P45452 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.01■□□□□ 0.15
MMP13P45452 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MMP13P45452 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MMP13P45452 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.01■□□□□ 0.15
MMP13P45452 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
MMP13P45452 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
MMP13P45452 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
MMP13P45452 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.01■□□□□ 0.15
MMP13P45452 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MMP13P45452 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.01■□□□□ 0.15
MMP13P45452 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP13P45452 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MMP13P45452 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP13P45452 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
MMP13P45452 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
MMP13P45452 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MMP13P45452 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.01■□□□□ 0.15
MMP13P45452 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP13P45452 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MMP13P45452 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP13P45452 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
MMP13P45452 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MMP13P45452 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.01■□□□□ 0.15
MMP13P45452 FAM8A3P-201ENST00000427218 844 ntBASIC16.01■□□□□ 0.15
MMP13P45452 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.01■□□□□ 0.15
MMP13P45452 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.01■□□□□ 0.15
MMP13P45452 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MMP13P45452 TIMM17BP1-201ENST00000545713 516 ntBASIC16.01■□□□□ 0.15
MMP13P45452 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.01■□□□□ 0.15
MMP13P45452 AL355385.1-201ENST00000606123 409 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms