Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.06■□□□□ 0.16
MTHFRP42898 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.06■□□□□ 0.16
MTHFRP42898 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.06■□□□□ 0.16
MTHFRP42898 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
MTHFRP42898 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
MTHFRP42898 AC105917.1-201ENST00000506637 2539 ntBASIC16.06■□□□□ 0.16
MTHFRP42898 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MTHFRP42898 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.06■□□□□ 0.16
MTHFRP42898 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MTHFRP42898 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MTHFRP42898 AC148477.4-201ENST00000613430 1793 ntBASIC16.05■□□□□ 0.16
MTHFRP42898 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MTHFRP42898 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MTHFRP42898 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MTHFRP42898 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.05■□□□□ 0.16
MTHFRP42898 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.05■□□□□ 0.16
MTHFRP42898 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 AL645937.2-201ENST00000396808 931 ntBASIC16.05■□□□□ 0.16
MTHFRP42898 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.05■□□□□ 0.16
MTHFRP42898 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.05■□□□□ 0.16
MTHFRP42898 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.05■□□□□ 0.16
MTHFRP42898 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.05■□□□□ 0.16
MTHFRP42898 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.05■□□□□ 0.16
MTHFRP42898 PPY2P-201ENST00000582808 702 ntBASIC16.05■□□□□ 0.16
MTHFRP42898 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
MTHFRP42898 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.05■□□□□ 0.16
MTHFRP42898 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MTHFRP42898 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
MTHFRP42898 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.05■□□□□ 0.16
MTHFRP42898 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 AC005052.1-201ENST00000625181 2492 ntBASIC16.05■□□□□ 0.16
MTHFRP42898 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MTHFRP42898 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.05■□□□□ 0.16
MTHFRP42898 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.05■□□□□ 0.16
MTHFRP42898 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
MTHFRP42898 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MTHFRP42898 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.04■□□□□ 0.16
MTHFRP42898 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.04■□□□□ 0.16
MTHFRP42898 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
MTHFRP42898 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MTHFRP42898 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.04■□□□□ 0.16
MTHFRP42898 AL139094.1-201ENST00000405549 1188 ntBASIC16.04■□□□□ 0.16
MTHFRP42898 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.04■□□□□ 0.16
MTHFRP42898 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.04■□□□□ 0.16
MTHFRP42898 Z97180.1-201ENST00000445173 988 ntBASIC16.04■□□□□ 0.16
MTHFRP42898 SPTLC1P5-201ENST00000450718 252 ntBASIC16.04■□□□□ 0.16
MTHFRP42898 RPS2P36-201ENST00000456516 831 ntBASIC16.04■□□□□ 0.16
MTHFRP42898 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.04■□□□□ 0.16
MTHFRP42898 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.04■□□□□ 0.16
MTHFRP42898 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.04■□□□□ 0.16
MTHFRP42898 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.04■□□□□ 0.16
MTHFRP42898 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.04■□□□□ 0.16
MTHFRP42898 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.04■□□□□ 0.16
MTHFRP42898 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MTHFRP42898 ZACNP1-201ENST00000612259 710 ntBASIC16.04■□□□□ 0.16
MTHFRP42898 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.04■□□□□ 0.16
MTHFRP42898 AC103702.1-201ENST00000548801 2630 ntBASIC16.04■□□□□ 0.16
MTHFRP42898 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.04■□□□□ 0.16
MTHFRP42898 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MTHFRP42898 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MTHFRP42898 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
MTHFRP42898 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms