Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT9P35527 TUBB3P1-201ENST00000405796 1332 ntBASIC16.89■□□□□ 0.29
KRT9P35527 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KRT9P35527 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT9P35527 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
KRT9P35527 AC117489.1-201ENST00000625169 3217 ntBASIC16.89■□□□□ 0.29
KRT9P35527 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT9P35527 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
KRT9P35527 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT9P35527 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT9P35527 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.88■□□□□ 0.29
KRT9P35527 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
KRT9P35527 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.88■□□□□ 0.29
KRT9P35527 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.88■□□□□ 0.29
KRT9P35527 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT9P35527 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT9P35527 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT9P35527 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT9P35527 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT9P35527 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT9P35527 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT9P35527 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT9P35527 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT9P35527 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT9P35527 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
KRT9P35527 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT9P35527 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
KRT9P35527 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT9P35527 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
KRT9P35527 GHSR-202ENST00000427970 912 ntBASIC16.87■□□□□ 0.29
KRT9P35527 TARDBPP1-201ENST00000442013 1203 ntBASIC16.87■□□□□ 0.29
KRT9P35527 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT9P35527 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.87■□□□□ 0.29
KRT9P35527 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT9P35527 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.87■□□□□ 0.29
KRT9P35527 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.87■□□□□ 0.29
KRT9P35527 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.87■□□□□ 0.29
KRT9P35527 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT9P35527 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.87■□□□□ 0.29
KRT9P35527 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
KRT9P35527 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT9P35527 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.87■□□□□ 0.29
KRT9P35527 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
KRT9P35527 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
KRT9P35527 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.87■□□□□ 0.29
KRT9P35527 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
KRT9P35527 GRK6P1-201ENST00000400595 1711 ntBASIC16.87■□□□□ 0.29
KRT9P35527 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT9P35527 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT9P35527 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT9P35527 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
KRT9P35527 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.87■□□□□ 0.29
KRT9P35527 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT9P35527 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT9P35527 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT9P35527 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms