Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 AL031133.1-201ENST00000406807 723 ntBASIC11.38□□□□□ -0.59
CKS2P33552 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.38□□□□□ -0.59
CKS2P33552 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC11.38□□□□□ -0.59
CKS2P33552 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC11.38□□□□□ -0.59
CKS2P33552 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC11.38□□□□□ -0.59
CKS2P33552 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.38□□□□□ -0.59
CKS2P33552 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.38□□□□□ -0.59
CKS2P33552 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.38□□□□□ -0.59
CKS2P33552 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.38□□□□□ -0.59
CKS2P33552 AL450472.2-201ENST00000603663 1156 ntBASIC11.38□□□□□ -0.59
CKS2P33552 AC116407.4-201ENST00000623319 1061 ntBASIC11.38□□□□□ -0.59
CKS2P33552 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.38□□□□□ -0.59
CKS2P33552 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.38□□□□□ -0.59
CKS2P33552 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 REXO1L2P-201ENST00000425429 2069 ntBASIC11.38□□□□□ -0.59
CKS2P33552 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
CKS2P33552 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.38□□□□□ -0.59
CKS2P33552 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.38□□□□□ -0.59
CKS2P33552 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.38□□□□□ -0.59
CKS2P33552 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.38□□□□□ -0.59
CKS2P33552 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CKS2P33552 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
CKS2P33552 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.38□□□□□ -0.59
CKS2P33552 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CKS2P33552 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.37□□□□□ -0.59
CKS2P33552 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
CKS2P33552 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.37□□□□□ -0.59
CKS2P33552 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
CKS2P33552 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
CKS2P33552 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.37□□□□□ -0.59
CKS2P33552 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CKS2P33552 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.37□□□□□ -0.59
CKS2P33552 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
CKS2P33552 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
CKS2P33552 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
CKS2P33552 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.37□□□□□ -0.59
CKS2P33552 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
CKS2P33552 FAM86EP-206ENST00000510506 987 ntBASIC11.37□□□□□ -0.59
CKS2P33552 MIR3180-1-201ENST00000580374 94 ntBASIC11.37□□□□□ -0.59
CKS2P33552 MIR3180-3-201ENST00000584616 94 ntBASIC11.37□□□□□ -0.59
CKS2P33552 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
CKS2P33552 FHL2-212ENST00000607522 759 ntTSL 2 BASIC11.37□□□□□ -0.59
CKS2P33552 ACTL9-202ENST00000612068 1252 ntBASIC11.37□□□□□ -0.59
CKS2P33552 MIR1199-201ENST00000621445 119 ntBASIC11.37□□□□□ -0.59
CKS2P33552 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC11.37□□□□□ -0.59
CKS2P33552 AL359183.1-201ENST00000623796 2132 ntBASIC11.37□□□□□ -0.59
CKS2P33552 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
CKS2P33552 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
CKS2P33552 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.37□□□□□ -0.59
CKS2P33552 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
CKS2P33552 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CKS2P33552 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms