Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.93□□□□□ -0.34
LMO1P25800 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.93□□□□□ -0.34
LMO1P25800 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LMO1P25800 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.93□□□□□ -0.34
LMO1P25800 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.93□□□□□ -0.34
LMO1P25800 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.93□□□□□ -0.34
LMO1P25800 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.93□□□□□ -0.34
LMO1P25800 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.93□□□□□ -0.34
LMO1P25800 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.93□□□□□ -0.34
LMO1P25800 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.93□□□□□ -0.34
LMO1P25800 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
LMO1P25800 AP000845.1-201ENST00000581677 2131 ntBASIC12.93□□□□□ -0.34
LMO1P25800 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.93□□□□□ -0.34
LMO1P25800 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.93□□□□□ -0.34
LMO1P25800 AL359183.1-201ENST00000623796 2132 ntBASIC12.93□□□□□ -0.34
LMO1P25800 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.93□□□□□ -0.34
LMO1P25800 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LMO1P25800 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LMO1P25800 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.93□□□□□ -0.34
LMO1P25800 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
LMO1P25800 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LMO1P25800 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.92□□□□□ -0.34
LMO1P25800 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.92□□□□□ -0.34
LMO1P25800 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.92□□□□□ -0.34
LMO1P25800 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.92□□□□□ -0.34
LMO1P25800 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
LMO1P25800 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.92□□□□□ -0.34
LMO1P25800 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.92□□□□□ -0.34
LMO1P25800 GAPDHP40-201ENST00000505218 1006 ntBASIC12.92□□□□□ -0.34
LMO1P25800 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.92□□□□□ -0.34
LMO1P25800 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.92□□□□□ -0.34
LMO1P25800 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.92□□□□□ -0.34
LMO1P25800 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
LMO1P25800 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.92□□□□□ -0.34
LMO1P25800 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.92□□□□□ -0.34
LMO1P25800 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.92□□□□□ -0.34
LMO1P25800 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.92□□□□□ -0.34
LMO1P25800 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.92□□□□□ -0.34
LMO1P25800 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 AL390754.1-201ENST00000619088 582 ntBASIC12.92□□□□□ -0.34
LMO1P25800 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 AL158212.4-201ENST00000624062 1286 ntBASIC12.92□□□□□ -0.34
LMO1P25800 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
LMO1P25800 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.92□□□□□ -0.34
LMO1P25800 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LMO1P25800 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
LMO1P25800 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.92□□□□□ -0.34
LMO1P25800 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LMO1P25800 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.92□□□□□ -0.34
LMO1P25800 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LMO1P25800 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.91□□□□□ -0.34
LMO1P25800 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.91□□□□□ -0.34
LMO1P25800 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LMO1P25800 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms