Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX1P22670 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX1P22670 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.78■□□□□ 0.28
RFX1P22670 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
RFX1P22670 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX1P22670 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.77■□□□□ 0.28
RFX1P22670 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.77■□□□□ 0.28
RFX1P22670 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RFX1P22670 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX1P22670 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.77■□□□□ 0.28
RFX1P22670 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX1P22670 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX1P22670 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX1P22670 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.77■□□□□ 0.28
RFX1P22670 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX1P22670 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFX1P22670 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.77■□□□□ 0.28
RFX1P22670 KRT43P-201ENST00000434019 910 ntBASIC16.77■□□□□ 0.28
RFX1P22670 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.77■□□□□ 0.28
RFX1P22670 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.77■□□□□ 0.28
RFX1P22670 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX1P22670 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.77■□□□□ 0.28
RFX1P22670 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX1P22670 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.77■□□□□ 0.28
RFX1P22670 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.77■□□□□ 0.28
RFX1P22670 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFX1P22670 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.77■□□□□ 0.28
RFX1P22670 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX1P22670 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX1P22670 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RFX1P22670 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFX1P22670 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFX1P22670 AC091951.1-201ENST00000512854 2465 ntBASIC16.77■□□□□ 0.27
RFX1P22670 MIR600HG-201ENST00000449175 5984 ntBASIC16.77■□□□□ 0.27
RFX1P22670 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
RFX1P22670 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RFX1P22670 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RFX1P22670 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.77■□□□□ 0.27
RFX1P22670 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFX1P22670 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RFX1P22670 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFX1P22670 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RFX1P22670 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.77■□□□□ 0.27
RFX1P22670 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.77■□□□□ 0.27
RFX1P22670 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.77■□□□□ 0.27
RFX1P22670 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RFX1P22670 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.77■□□□□ 0.27
RFX1P22670 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFX1P22670 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.77■□□□□ 0.27
RFX1P22670 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.76■□□□□ 0.27
RFX1P22670 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.76■□□□□ 0.27
RFX1P22670 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RFX1P22670 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RFX1P22670 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RFX1P22670 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 AC067930.6-201ENST00000623257 4947 ntBASIC16.76■□□□□ 0.27
RFX1P22670 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RFX1P22670 BOLA2P3-201ENST00000404566 256 ntBASIC16.76■□□□□ 0.27
RFX1P22670 KRT18P64-201ENST00000434946 1219 ntBASIC16.76■□□□□ 0.27
RFX1P22670 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.76■□□□□ 0.27
RFX1P22670 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.76■□□□□ 0.27
RFX1P22670 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.76■□□□□ 0.27
RFX1P22670 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.76■□□□□ 0.27
RFX1P22670 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RFX1P22670 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
RFX1P22670 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.76■□□□□ 0.27
RFX1P22670 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.76■□□□□ 0.27
RFX1P22670 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX1P22670 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.75■□□□□ 0.27
RFX1P22670 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.75■□□□□ 0.27
RFX1P22670 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX1P22670 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms