Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.22□□□□□ -0.29
CCL1P22362 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.22□□□□□ -0.29
CCL1P22362 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CCL1P22362 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CCL1P22362 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CCL1P22362 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CCL1P22362 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL1P22362 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.22□□□□□ -0.29
CCL1P22362 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL1P22362 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.21□□□□□ -0.29
CCL1P22362 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CCL1P22362 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL1P22362 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL1P22362 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL1P22362 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCL1P22362 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.21□□□□□ -0.29
CCL1P22362 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL1P22362 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL1P22362 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCL1P22362 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL1P22362 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.21□□□□□ -0.29
CCL1P22362 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL1P22362 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCL1P22362 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.21□□□□□ -0.29
CCL1P22362 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
CCL1P22362 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL1P22362 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL1P22362 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCL1P22362 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CCL1P22362 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL1P22362 AL645937.2-201ENST00000396808 931 ntBASIC13.21□□□□□ -0.29
CCL1P22362 MIR1233-2-201ENST00000408138 82 ntBASIC13.21□□□□□ -0.29
CCL1P22362 MIR1233-1-201ENST00000408722 82 ntBASIC13.21□□□□□ -0.29
CCL1P22362 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.21□□□□□ -0.29
CCL1P22362 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.21□□□□□ -0.29
CCL1P22362 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.21□□□□□ -0.29
CCL1P22362 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.21□□□□□ -0.29
CCL1P22362 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.21□□□□□ -0.29
CCL1P22362 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.21□□□□□ -0.29
CCL1P22362 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.21□□□□□ -0.29
CCL1P22362 AC009407.1-201ENST00000568958 598 ntBASIC13.21□□□□□ -0.29
CCL1P22362 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCL1P22362 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CCL1P22362 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CCL1P22362 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL1P22362 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CCL1P22362 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CCL1P22362 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.21□□□□□ -0.29
CCL1P22362 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
CCL1P22362 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.21□□□□□ -0.3
CCL1P22362 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.21□□□□□ -0.3
CCL1P22362 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCL1P22362 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.21□□□□□ -0.3
CCL1P22362 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CCL1P22362 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL1P22362 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CCL1P22362 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.2□□□□□ -0.3
CCL1P22362 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CCL1P22362 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL1P22362 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL1P22362 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 AL353779.1-201ENST00000434793 351 ntBASIC13.2□□□□□ -0.3
CCL1P22362 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL1P22362 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.2□□□□□ -0.3
CCL1P22362 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.2□□□□□ -0.3
CCL1P22362 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.2□□□□□ -0.3
CCL1P22362 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL1P22362 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL1P22362 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.2□□□□□ -0.3
CCL1P22362 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CCL1P22362 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms