Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.13□□□□□ -0.31
BCL3P20749 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
BCL3P20749 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
BCL3P20749 AC100757.3-201ENST00000622361 1406 ntBASIC13.13□□□□□ -0.31
BCL3P20749 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BCL3P20749 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
BCL3P20749 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
BCL3P20749 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
BCL3P20749 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BCL3P20749 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BCL3P20749 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BCL3P20749 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
BCL3P20749 ACE3P-201ENST00000423435 1973 ntBASIC13.12□□□□□ -0.31
BCL3P20749 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.12□□□□□ -0.31
BCL3P20749 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BCL3P20749 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BCL3P20749 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BCL3P20749 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
BCL3P20749 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.12□□□□□ -0.31
BCL3P20749 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
BCL3P20749 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.12□□□□□ -0.31
BCL3P20749 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BCL3P20749 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BCL3P20749 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BCL3P20749 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BCL3P20749 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.12□□□□□ -0.31
BCL3P20749 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.12□□□□□ -0.31
BCL3P20749 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.12□□□□□ -0.31
BCL3P20749 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.12□□□□□ -0.31
BCL3P20749 IGHV3-42-201ENST00000520410 361 ntBASIC13.12□□□□□ -0.31
BCL3P20749 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.12□□□□□ -0.31
BCL3P20749 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.12□□□□□ -0.31
BCL3P20749 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.12□□□□□ -0.31
BCL3P20749 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.12□□□□□ -0.31
BCL3P20749 AL844908.2-201ENST00000609461 460 ntBASIC13.12□□□□□ -0.31
BCL3P20749 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
BCL3P20749 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
BCL3P20749 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
BCL3P20749 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BCL3P20749 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BCL3P20749 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BCL3P20749 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
BCL3P20749 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
BCL3P20749 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.12□□□□□ -0.31
BCL3P20749 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BCL3P20749 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
BCL3P20749 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.11□□□□□ -0.31
BCL3P20749 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
BCL3P20749 AC138969.3-201ENST00000546612 1459 ntBASIC13.11□□□□□ -0.31
BCL3P20749 AC138932.2-201ENST00000548268 1459 ntBASIC13.11□□□□□ -0.31
BCL3P20749 AC126755.4-201ENST00000549796 1459 ntBASIC13.11□□□□□ -0.31
BCL3P20749 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
BCL3P20749 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.11□□□□□ -0.31
BCL3P20749 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.11□□□□□ -0.31
BCL3P20749 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
BCL3P20749 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
BCL3P20749 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.11□□□□□ -0.31
BCL3P20749 MIR943-201ENST00000401286 94 ntBASIC13.11□□□□□ -0.31
BCL3P20749 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.11□□□□□ -0.31
BCL3P20749 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.11□□□□□ -0.31
BCL3P20749 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.11□□□□□ -0.31
BCL3P20749 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.11□□□□□ -0.31
BCL3P20749 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.11□□□□□ -0.31
BCL3P20749 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
BCL3P20749 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 AC011467.4-201ENST00000594891 528 ntBASIC13.11□□□□□ -0.31
BCL3P20749 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.11□□□□□ -0.31
BCL3P20749 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
BCL3P20749 AL158211.3-201ENST00000607385 239 ntBASIC13.11□□□□□ -0.31
BCL3P20749 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.11□□□□□ -0.31
BCL3P20749 AL590560.3-201ENST00000623350 461 ntBASIC13.11□□□□□ -0.31
BCL3P20749 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.11□□□□□ -0.31
BCL3P20749 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.11□□□□□ -0.31
BCL3P20749 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
BCL3P20749 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
BCL3P20749 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.11□□□□□ -0.31
BCL3P20749 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
BCL3P20749 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
BCL3P20749 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.11□□□□□ -0.31
BCL3P20749 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
BCL3P20749 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
BCL3P20749 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BCL3P20749 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms