Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.23□□□□□ -0.45
IFNA1P01562 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
IFNA1P01562 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC12.23□□□□□ -0.45
IFNA1P01562 KRT18P34-201ENST00000488218 1270 ntBASIC12.23□□□□□ -0.45
IFNA1P01562 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
IFNA1P01562 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.23□□□□□ -0.45
IFNA1P01562 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.23□□□□□ -0.45
IFNA1P01562 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 AC004706.3-202ENST00000621574 984 ntBASIC12.23□□□□□ -0.45
IFNA1P01562 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC12.23□□□□□ -0.45
IFNA1P01562 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
IFNA1P01562 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
IFNA1P01562 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
IFNA1P01562 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
IFNA1P01562 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
IFNA1P01562 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.22□□□□□ -0.45
IFNA1P01562 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.22□□□□□ -0.45
IFNA1P01562 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
IFNA1P01562 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 AL589702.1-201ENST00000641229 1509 ntBASIC12.22□□□□□ -0.45
IFNA1P01562 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.22□□□□□ -0.45
IFNA1P01562 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
IFNA1P01562 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.22□□□□□ -0.45
IFNA1P01562 AP005117.1-201ENST00000584346 1413 ntBASIC12.22□□□□□ -0.45
IFNA1P01562 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.22□□□□□ -0.45
IFNA1P01562 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.22□□□□□ -0.45
IFNA1P01562 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.22□□□□□ -0.45
IFNA1P01562 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.22□□□□□ -0.45
IFNA1P01562 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.22□□□□□ -0.45
IFNA1P01562 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.22□□□□□ -0.45
IFNA1P01562 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 GPX1P2-201ENST00000429271 606 ntBASIC12.22□□□□□ -0.45
IFNA1P01562 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.22□□□□□ -0.45
IFNA1P01562 AL671277.2-201ENST00000458060 996 ntBASIC12.22□□□□□ -0.45
IFNA1P01562 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.22□□□□□ -0.45
IFNA1P01562 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.22□□□□□ -0.45
IFNA1P01562 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.22□□□□□ -0.45
IFNA1P01562 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
IFNA1P01562 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
IFNA1P01562 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.22□□□□□ -0.45
IFNA1P01562 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
IFNA1P01562 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.22□□□□□ -0.45
IFNA1P01562 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.22□□□□□ -0.45
IFNA1P01562 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
IFNA1P01562 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.22□□□□□ -0.45
IFNA1P01562 AC089987.1-201ENST00000551654 2209 ntBASIC12.22□□□□□ -0.45
IFNA1P01562 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.22□□□□□ -0.45
IFNA1P01562 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
IFNA1P01562 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms