Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM3O75382 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM3O75382 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM3O75382 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRIM3O75382 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRIM3O75382 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM3O75382 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRIM3O75382 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM3O75382 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM3O75382 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.42□□□□□ -0.1
TRIM3O75382 AC018892.3-201ENST00000623986 2499 ntBASIC14.42□□□□□ -0.1
TRIM3O75382 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRIM3O75382 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM3O75382 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM3O75382 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM3O75382 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM3O75382 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM3O75382 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM3O75382 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRIM3O75382 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM3O75382 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM3O75382 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM3O75382 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM3O75382 AC087499.6-201ENST00000411576 835 ntBASIC14.42□□□□□ -0.1
TRIM3O75382 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM3O75382 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM3O75382 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM3O75382 TP53TG3HP-202ENST00000569755 579 ntBASIC14.42□□□□□ -0.1
TRIM3O75382 AC099568.2-201ENST00000609194 695 ntBASIC14.42□□□□□ -0.1
TRIM3O75382 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM3O75382 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM3O75382 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRIM3O75382 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM3O75382 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
TRIM3O75382 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM3O75382 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM3O75382 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM3O75382 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM3O75382 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM3O75382 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM3O75382 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM3O75382 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM3O75382 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM3O75382 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRIM3O75382 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRIM3O75382 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM3O75382 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM3O75382 CICP24-201ENST00000605464 2705 ntBASIC14.42□□□□□ -0.1
TRIM3O75382 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM3O75382 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM3O75382 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRIM3O75382 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRIM3O75382 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.41□□□□□ -0.1
TRIM3O75382 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRIM3O75382 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM3O75382 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM3O75382 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.41□□□□□ -0.1
TRIM3O75382 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM3O75382 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.41□□□□□ -0.1
TRIM3O75382 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM3O75382 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRIM3O75382 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM3O75382 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.41□□□□□ -0.1
TRIM3O75382 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM3O75382 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM3O75382 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.41□□□□□ -0.1
TRIM3O75382 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRIM3O75382 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM3O75382 AC140912.1-201ENST00000577171 1054 ntBASIC14.41□□□□□ -0.1
TRIM3O75382 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.41□□□□□ -0.1
TRIM3O75382 AC025048.6-201ENST00000634326 1161 ntBASIC14.41□□□□□ -0.1
TRIM3O75382 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 AL607033.1-201ENST00000623900 1599 ntBASIC14.41□□□□□ -0.1
TRIM3O75382 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRIM3O75382 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM3O75382 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM3O75382 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM3O75382 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM3O75382 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRIM3O75382 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
TRIM3O75382 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM3O75382 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms