Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
R3HCC1Q9Y3T6 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
R3HCC1Q9Y3T6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 MBLAC2-202ENST00000514906 1936 ntBASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 AC023141.5-201ENST00000458585 616 ntBASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 AC073439.1-201ENST00000624121 1774 ntBASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 Z82170.1-201ENST00000625081 3192 ntBASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
R3HCC1Q9Y3T6 GALC-206ENST00000544807 2528 ntTSL 2 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 AL627223.1-201ENST00000416693 442 ntBASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.74■□□□□ 0.43
R3HCC1Q9Y3T6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms