Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC055811.4-201ENST00000624039 1754 ntBASIC16.69■□□□□ 0.26
HIPK3Q9H422 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.69■□□□□ 0.26
HIPK3Q9H422 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 AGGF1P2-201ENST00000426656 2106 ntBASIC16.69■□□□□ 0.26
HIPK3Q9H422 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HIPK3Q9H422 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HIPK3Q9H422 AC079328.2-201ENST00000561241 3354 ntBASIC16.69■□□□□ 0.26
HIPK3Q9H422 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HIPK3Q9H422 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.69■□□□□ 0.26
HIPK3Q9H422 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.69■□□□□ 0.26
HIPK3Q9H422 GHSR-202ENST00000427970 912 ntBASIC16.69■□□□□ 0.26
HIPK3Q9H422 AC069218.1-201ENST00000435269 762 ntBASIC16.69■□□□□ 0.26
HIPK3Q9H422 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.69■□□□□ 0.26
HIPK3Q9H422 AC104073.2-201ENST00000453737 312 ntBASIC16.69■□□□□ 0.26
HIPK3Q9H422 TUBB8P8-201ENST00000458717 1058 ntBASIC16.69■□□□□ 0.26
HIPK3Q9H422 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.69■□□□□ 0.26
HIPK3Q9H422 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.69■□□□□ 0.26
HIPK3Q9H422 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.69■□□□□ 0.26
HIPK3Q9H422 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HIPK3Q9H422 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.69■□□□□ 0.26
HIPK3Q9H422 CLUHP2-201ENST00000426660 1303 ntBASIC16.69■□□□□ 0.26
HIPK3Q9H422 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIPK3Q9H422 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 AC004899.1-201ENST00000424687 1714 ntBASIC16.68■□□□□ 0.26
HIPK3Q9H422 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 AL596087.1-201ENST00000400979 1969 ntBASIC16.68■□□□□ 0.26
HIPK3Q9H422 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 AC234782.1-201ENST00000451950 919 ntBASIC16.68■□□□□ 0.26
HIPK3Q9H422 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 AF254983.2-201ENST00000612331 135 ntBASIC16.68■□□□□ 0.26
HIPK3Q9H422 AP000346.4-201ENST00000614827 381 ntBASIC16.68■□□□□ 0.26
HIPK3Q9H422 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 AC084364.1-201ENST00000551967 1556 ntBASIC16.68■□□□□ 0.26
HIPK3Q9H422 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.68■□□□□ 0.26
HIPK3Q9H422 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK3Q9H422 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
HIPK3Q9H422 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 PCDHA14-201ENST00000506751 2298 ntBASIC16.67■□□□□ 0.26
HIPK3Q9H422 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK3Q9H422 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
HIPK3Q9H422 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
HIPK3Q9H422 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HIPK3Q9H422 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.67■□□□□ 0.26
HIPK3Q9H422 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms