Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 AC079140.1-201ENST00000508039 487 ntBASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 AL031595.1-201ENST00000623969 4709 ntBASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 ACE3P-201ENST00000423435 1973 ntBASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
COMMD4Q9H0A8 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 AL359258.3-201ENST00000622910 2331 ntBASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD4Q9H0A8 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD4Q9H0A8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms