Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PHACTR1Q9C0D0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHACTR1Q9C0D0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHACTR1Q9C0D0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PHACTR1Q9C0D0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHACTR1Q9C0D0 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PHACTR1Q9C0D0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.66■□□□□ 0.1
PHACTR1Q9C0D0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PHACTR1Q9C0D0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHACTR1Q9C0D0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHACTR1Q9C0D0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.66■□□□□ 0.1
PHACTR1Q9C0D0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHACTR1Q9C0D0 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.66■□□□□ 0.1
PHACTR1Q9C0D0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHACTR1Q9C0D0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PHACTR1Q9C0D0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHACTR1Q9C0D0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 MTHFR-210ENST00000641407 2387 ntBASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 AL080243.2-201ENST00000418783 582 ntBASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 ALG1L5P-201ENST00000482043 771 ntBASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 AC015802.1-201ENST00000588104 1449 ntBASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHACTR1Q9C0D0 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 MIR600HG-201ENST00000449175 5984 ntBASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 AC093520.2-201ENST00000561830 333 ntBASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 AC003101.2-201ENST00000612557 442 ntBASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 PCDHA3-202ENST00000532566 4594 ntBASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PHACTR1Q9C0D0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms