Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 REXO1L8P-201ENST00000604378 1897 ntBASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 GK-202ENST00000378941 458 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 NME2P1-201ENST00000426182 414 ntBASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 AC010336.2-201ENST00000564226 506 ntBASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 AC007541.1-201ENST00000570282 1469 ntBASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAF4Q9BUZ4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 AL359881.3-201ENST00000602640 1721 ntBASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 COX5BP8-201ENST00000416911 349 ntBASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 AL353779.1-201ENST00000434793 351 ntBASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 AL512361.1-201ENST00000554200 418 ntBASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 TP53TG3HP-202ENST00000569755 579 ntBASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 HSPA7-201ENST00000445535 1927 ntBASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 AC117489.1-201ENST00000625169 3217 ntBASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAF4Q9BUZ4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 KRT8P12-202ENST00000472924 1397 ntBASIC13.84□□□□□ -0.19
TRAF4Q9BUZ4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms