Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UPK3BQ9BT76 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 MYCLP2-201ENST00000449268 967 ntBASIC10.8□□□□□ -0.68
UPK3BQ9BT76 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 RPL13AP25-201ENST00000484130 612 ntBASIC10.8□□□□□ -0.68
UPK3BQ9BT76 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 CMC2-214ENST00000565925 640 ntTSL 5 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 AC008494.3-201ENST00000606615 944 ntBASIC10.8□□□□□ -0.68
UPK3BQ9BT76 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 VILL-207ENST00000465644 1857 ntTSL 5 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 AL359258.3-201ENST00000622910 2331 ntBASIC10.8□□□□□ -0.68
UPK3BQ9BT76 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UPK3BQ9BT76 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
UPK3BQ9BT76 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC10.79□□□□□ -0.68
UPK3BQ9BT76 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UPK3BQ9BT76 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
UPK3BQ9BT76 AL359183.1-201ENST00000623796 2132 ntBASIC10.79□□□□□ -0.68
UPK3BQ9BT76 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC10.79□□□□□ -0.68
UPK3BQ9BT76 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC10.79□□□□□ -0.68
UPK3BQ9BT76 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
UPK3BQ9BT76 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UPK3BQ9BT76 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
UPK3BQ9BT76 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms