Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 SPDYE12P-201ENST00000618416 771 ntBASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 AJ011932.1-201ENST00000621707 465 ntBASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TUBA1CQ9BQE3 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 AL035456.1-201ENST00000456064 1369 ntBASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 ZBED1P1-201ENST00000502364 1930 ntBASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 BX640514.1-201ENST00000583223 1918 ntBASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 MTND6P24-201ENST00000440466 518 ntBASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 AL512638.1-201ENST00000457493 794 ntBASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 AC117489.1-201ENST00000625169 3217 ntBASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TUBA1CQ9BQE3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TUBA1CQ9BQE3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms