Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LYSTQ99698 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LYSTQ99698 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC10.39□□□□□ -0.75
LYSTQ99698 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC10.39□□□□□ -0.75
LYSTQ99698 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC10.39□□□□□ -0.75
LYSTQ99698 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
LYSTQ99698 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
LYSTQ99698 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC10.39□□□□□ -0.75
LYSTQ99698 AC024293.1-201ENST00000467930 498 ntBASIC10.39□□□□□ -0.75
LYSTQ99698 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
LYSTQ99698 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
LYSTQ99698 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LYSTQ99698 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LYSTQ99698 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LYSTQ99698 AC008741.2-201ENST00000612792 3115 ntBASIC10.39□□□□□ -0.75
LYSTQ99698 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LYSTQ99698 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LYSTQ99698 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LYSTQ99698 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC10.38□□□□□ -0.75
LYSTQ99698 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
LYSTQ99698 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC10.38□□□□□ -0.75
LYSTQ99698 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC10.38□□□□□ -0.75
LYSTQ99698 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LYSTQ99698 AC020916.1-201ENST00000587762 1774 ntBASIC10.38□□□□□ -0.75
LYSTQ99698 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LYSTQ99698 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LYSTQ99698 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC10.38□□□□□ -0.75
LYSTQ99698 BLK-205ENST00000529894 2017 ntTSL 5 BASIC10.38□□□□□ -0.75
LYSTQ99698 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LYSTQ99698 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC10.38□□□□□ -0.75
LYSTQ99698 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC10.38□□□□□ -0.75
LYSTQ99698 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC10.38□□□□□ -0.75
LYSTQ99698 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC10.38□□□□□ -0.75
LYSTQ99698 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC10.38□□□□□ -0.75
LYSTQ99698 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC10.38□□□□□ -0.75
LYSTQ99698 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LYSTQ99698 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LYSTQ99698 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LYSTQ99698 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC10.38□□□□□ -0.75
LYSTQ99698 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC10.38□□□□□ -0.75
LYSTQ99698 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC10.38□□□□□ -0.75
LYSTQ99698 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LYSTQ99698 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LYSTQ99698 AC239868.1-201ENST00000369385 493 ntBASIC10.38□□□□□ -0.75
LYSTQ99698 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LYSTQ99698 AL645937.2-201ENST00000396808 931 ntBASIC10.38□□□□□ -0.75
LYSTQ99698 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LYSTQ99698 AL627422.1-201ENST00000434104 580 ntBASIC10.38□□□□□ -0.75
LYSTQ99698 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LYSTQ99698 MESTP3-201ENST00000503460 968 ntBASIC10.38□□□□□ -0.75
LYSTQ99698 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC10.38□□□□□ -0.75
LYSTQ99698 MIR4522-201ENST00000584932 87 ntBASIC10.38□□□□□ -0.75
LYSTQ99698 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC10.38□□□□□ -0.75
LYSTQ99698 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LYSTQ99698 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LYSTQ99698 LRRC59-203ENST00000576448 1531 ntBASIC10.38□□□□□ -0.75
LYSTQ99698 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
LYSTQ99698 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
LYSTQ99698 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LYSTQ99698 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LYSTQ99698 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC10.37□□□□□ -0.75
LYSTQ99698 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC10.37□□□□□ -0.75
LYSTQ99698 CR383656.3-201ENST00000551315 183 ntBASIC10.37□□□□□ -0.75
LYSTQ99698 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
LYSTQ99698 RPS5-204ENST00000598098 536 ntTSL 2 BASIC10.37□□□□□ -0.75
LYSTQ99698 AC090510.3-201ENST00000615831 821 ntBASIC10.37□□□□□ -0.75
LYSTQ99698 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC10.37□□□□□ -0.75
LYSTQ99698 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LYSTQ99698 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 PFN2-206ENST00000461930 606 ntTSL 4 BASIC10.37□□□□□ -0.75
LYSTQ99698 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.37□□□□□ -0.75
LYSTQ99698 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LYSTQ99698 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
LYSTQ99698 AC005041.3-201ENST00000606287 649 ntBASIC10.37□□□□□ -0.75
LYSTQ99698 AC084781.1-201ENST00000613737 656 ntBASIC10.37□□□□□ -0.75
LYSTQ99698 CR392039.1-201ENST00000623217 204 ntBASIC10.37□□□□□ -0.75
LYSTQ99698 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC10.37□□□□□ -0.75
LYSTQ99698 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC10.37□□□□□ -0.75
LYSTQ99698 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 AL603832.2-201ENST00000566195 2125 ntBASIC10.37□□□□□ -0.75
LYSTQ99698 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC10.37□□□□□ -0.75
LYSTQ99698 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LYSTQ99698 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LYSTQ99698 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms