Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 IGHV3-22-201ENST00000520721 359 ntBASIC12.55□□□□□ -0.4
RAB40CQ96S21 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 AC092135.3-201ENST00000624151 1846 ntBASIC12.55□□□□□ -0.4
RAB40CQ96S21 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB40CQ96S21 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB40CQ96S21 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RAB40CQ96S21 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB40CQ96S21 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB40CQ96S21 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB40CQ96S21 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms