Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL21A1Q96P44 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL21A1Q96P44 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL21A1Q96P44 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL21A1Q96P44 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL21A1Q96P44 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL21A1Q96P44 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COL21A1Q96P44 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 INGX-202ENST00000489074 768 ntBASIC14.62□□□□□ -0.07
COL21A1Q96P44 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL21A1Q96P44 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL21A1Q96P44 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL21A1Q96P44 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL21A1Q96P44 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL21A1Q96P44 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COL21A1Q96P44 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COL21A1Q96P44 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.62□□□□□ -0.07
COL21A1Q96P44 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.61□□□□□ -0.07
COL21A1Q96P44 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 AC009477.1-201ENST00000452936 217 ntBASIC14.61□□□□□ -0.07
COL21A1Q96P44 AC004890.2-204ENST00000481968 304 ntBASIC14.61□□□□□ -0.07
COL21A1Q96P44 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 ZNF890P-202ENST00000530367 1156 ntBASIC14.61□□□□□ -0.07
COL21A1Q96P44 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.61□□□□□ -0.07
COL21A1Q96P44 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COL21A1Q96P44 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 AC022144.1-201ENST00000602255 1580 ntBASIC14.6□□□□□ -0.07
COL21A1Q96P44 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms