Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 SLC7A15P-201ENST00000424028 1363 ntBASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 AC009118.2-201ENST00000613275 655 ntBASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 AL359258.3-201ENST00000622910 2331 ntBASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 CICP14-201ENST00000629111 2732 ntBASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDLIM5Q96HC4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15□□□□□ -0.01
PDLIM5Q96HC4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 SPTLC1P1-201ENST00000447199 261 ntBASIC15□□□□□ -0.01
PDLIM5Q96HC4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 TMPRSS11CP-201ENST00000453277 683 ntBASIC15□□□□□ -0.01
PDLIM5Q96HC4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 INGX-202ENST00000489074 768 ntBASIC15□□□□□ -0.01
PDLIM5Q96HC4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 AC055876.2-201ENST00000531834 546 ntBASIC15□□□□□ -0.01
PDLIM5Q96HC4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 AC106881.1-201ENST00000605849 3329 ntBASIC15□□□□□ -0.01
PDLIM5Q96HC4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDLIM5Q96HC4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15□□□□□ -0.01
PDLIM5Q96HC4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 AL158070.2-201ENST00000623713 1621 ntBASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDLIM5Q96HC4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms