Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CHCHD1Q96BP2 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CHCHD1Q96BP2 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.23□□□□□ -0.61
CHCHD1Q96BP2 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CHCHD1Q96BP2 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CHCHD1Q96BP2 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CHCHD1Q96BP2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CHCHD1Q96BP2 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
CHCHD1Q96BP2 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 SLC25A3P1-201ENST00000443844 931 ntBASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 AC112907.2-201ENST00000448639 330 ntBASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 TCAM1P-207ENST00000485295 1537 ntBASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 AC091607.1-201ENST00000490318 1060 ntBASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 AC096582.2-201ENST00000510860 516 ntBASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 SPTSSB-204ENST00000617024 1292 ntBASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 AL022326.1-202ENST00000641533 845 ntBASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
CHCHD1Q96BP2 AC004241.5-201ENST00000623870 2448 ntBASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CHCHD1Q96BP2 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms