Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 REXO1L2P-201ENST00000425429 2069 ntBASIC14.88□□□□□ -0.03
VPS33AQ96AX1 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VPS33AQ96AX1 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 YBX2P1-201ENST00000394192 760 ntBASIC14.87□□□□□ -0.03
VPS33AQ96AX1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 FAM8A3P-201ENST00000427218 844 ntBASIC14.87□□□□□ -0.03
VPS33AQ96AX1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPS33AQ96AX1 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 HIST3H2BA-201ENST00000436555 524 ntBASIC14.86□□□□□ -0.03
VPS33AQ96AX1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 BANF1P1-201ENST00000553684 263 ntBASIC14.86□□□□□ -0.03
VPS33AQ96AX1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 MTHFR-210ENST00000641407 2387 ntBASIC14.86□□□□□ -0.03
VPS33AQ96AX1 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 AC138969.2-201ENST00000532739 9932 ntBASIC14.86□□□□□ -0.03
VPS33AQ96AX1 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPS33AQ96AX1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.85□□□□□ -0.03
VPS33AQ96AX1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms