Protein–RNA interactions for Protein: Q92954

PRG4, Proteoglycan 4, humanhuman

Predicted RBP Predictions only

Length 1,404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG4Q92954 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PRG4Q92954 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PRG4Q92954 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRG4Q92954 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRG4Q92954 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRG4Q92954 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC23.78■■□□□ 1.4
PRG4Q92954 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PRG4Q92954 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC23.78■■□□□ 1.4
PRG4Q92954 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PRG4Q92954 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PRG4Q92954 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC23.78■■□□□ 1.4
PRG4Q92954 LINC01815-202ENST00000641468 1409 ntBASIC23.78■■□□□ 1.4
PRG4Q92954 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRG4Q92954 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRG4Q92954 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRG4Q92954 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC23.77■■□□□ 1.4
PRG4Q92954 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRG4Q92954 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC23.77■■□□□ 1.4
PRG4Q92954 FAM86KP-201ENST00000509817 987 ntBASIC23.77■■□□□ 1.4
PRG4Q92954 AC114947.1-202ENST00000514136 344 ntBASIC23.77■■□□□ 1.4
PRG4Q92954 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC23.77■■□□□ 1.4
PRG4Q92954 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC23.77■■□□□ 1.4
PRG4Q92954 DBP-202ENST00000593500 712 ntTSL 2 BASIC23.77■■□□□ 1.4
PRG4Q92954 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC23.77■■□□□ 1.4
PRG4Q92954 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC23.77■■□□□ 1.4
PRG4Q92954 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRG4Q92954 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRG4Q92954 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRG4Q92954 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRG4Q92954 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PRG4Q92954 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PRG4Q92954 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.39
PRG4Q92954 COX20P1-201ENST00000366529 357 ntBASIC23.76■■□□□ 1.39
PRG4Q92954 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PRG4Q92954 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PRG4Q92954 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRG4Q92954 GCSHP3-201ENST00000431120 391 ntBASIC23.76■■□□□ 1.39
PRG4Q92954 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PRG4Q92954 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC23.76■■□□□ 1.39
PRG4Q92954 MIR4472-1-201ENST00000584349 80 ntBASIC23.76■■□□□ 1.39
PRG4Q92954 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC23.76■■□□□ 1.39
PRG4Q92954 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC23.76■■□□□ 1.39
PRG4Q92954 AC002472.4-201ENST00000641915 272 ntBASIC23.76■■□□□ 1.39
PRG4Q92954 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC23.76■■□□□ 1.39
PRG4Q92954 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PRG4Q92954 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PRG4Q92954 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC23.76■■□□□ 1.39
PRG4Q92954 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PRG4Q92954 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC23.76■■□□□ 1.39
PRG4Q92954 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRG4Q92954 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC23.76■■□□□ 1.39
PRG4Q92954 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PRG4Q92954 REXO1L4P-201ENST00000605109 1937 ntBASIC23.76■■□□□ 1.39
PRG4Q92954 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC23.76■■□□□ 1.39
PRG4Q92954 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
PRG4Q92954 PES1-204ENST00000402284 2144 ntTSL 5 BASIC23.76■■□□□ 1.39
PRG4Q92954 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC23.76■■□□□ 1.39
PRG4Q92954 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC23.76■■□□□ 1.39
PRG4Q92954 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC23.76■■□□□ 1.39
PRG4Q92954 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC23.76■■□□□ 1.39
PRG4Q92954 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC23.76■■□□□ 1.39
PRG4Q92954 PLS3-210ENST00000626746 216 ntTSL 4 BASIC23.76■■□□□ 1.39
PRG4Q92954 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC23.75■■□□□ 1.39
PRG4Q92954 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PRG4Q92954 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRG4Q92954 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
PRG4Q92954 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRG4Q92954 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
PRG4Q92954 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRG4Q92954 AC003102.2-201ENST00000589195 1469 ntBASIC23.75■■□□□ 1.39
PRG4Q92954 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PRG4Q92954 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC23.75■■□□□ 1.39
PRG4Q92954 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRG4Q92954 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
PRG4Q92954 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
PRG4Q92954 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PRG4Q92954 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRG4Q92954 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC23.75■■□□□ 1.39
PRG4Q92954 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
PRG4Q92954 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRG4Q92954 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC23.75■■□□□ 1.39
PRG4Q92954 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC23.75■■□□□ 1.39
PRG4Q92954 HLA-DMA-203ENST00000395305 777 ntBASIC23.75■■□□□ 1.39
PRG4Q92954 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PRG4Q92954 NAMA-206ENST00000605377 509 ntTSL 5 BASIC23.75■■□□□ 1.39
PRG4Q92954 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC23.75■■□□□ 1.39
PRG4Q92954 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PRG4Q92954 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRG4Q92954 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PRG4Q92954 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRG4Q92954 HLA-DQB1-202ENST00000399079 1501 ntBASIC23.74■■□□□ 1.39
PRG4Q92954 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PRG4Q92954 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRG4Q92954 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PRG4Q92954 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRG4Q92954 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PRG4Q92954 LINC02447-202ENST00000501888 2146 ntBASIC23.74■■□□□ 1.39
PRG4Q92954 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PRG4Q92954 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PRG4Q92954 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms