Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.73■□□□□ 0.11
GRIN3AQ8TCU5 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GRIN3AQ8TCU5 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.73■□□□□ 0.11
GRIN3AQ8TCU5 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GRIN3AQ8TCU5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
GRIN3AQ8TCU5 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GRIN3AQ8TCU5 AC020658.6-201ENST00000623564 1870 ntBASIC15.73■□□□□ 0.11
GRIN3AQ8TCU5 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
GRIN3AQ8TCU5 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GRIN3AQ8TCU5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
GRIN3AQ8TCU5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GRIN3AQ8TCU5 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GRIN3AQ8TCU5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GRIN3AQ8TCU5 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GRIN3AQ8TCU5 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 GPR53P-205ENST00000457298 1084 ntBASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 HILS1-202ENST00000545329 423 ntBASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 AC008735.3-201ENST00000596646 500 ntBASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 RPSAP52-203ENST00000622976 1023 ntBASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GRIN3AQ8TCU5 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 AC009090.5-201ENST00000624886 2285 ntBASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 AC105250.1-201ENST00000509378 2057 ntBASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 AC107373.2-201ENST00000607735 490 ntBASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.71■□□□□ 0.11
GRIN3AQ8TCU5 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
GRIN3AQ8TCU5 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
GRIN3AQ8TCU5 AC022532.1-201ENST00000624563 1728 ntBASIC15.71■□□□□ 0.1
GRIN3AQ8TCU5 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
GRIN3AQ8TCU5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
GRIN3AQ8TCU5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
GRIN3AQ8TCU5 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
GRIN3AQ8TCU5 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms