Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 AL139094.1-201ENST00000405549 1188 ntBASIC16.41■□□□□ 0.22
LMO3Q8TAP4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 NUS1P3-201ENST00000423502 862 ntBASIC16.41■□□□□ 0.22
LMO3Q8TAP4 HMGN1P19-201ENST00000436976 333 ntBASIC16.41■□□□□ 0.22
LMO3Q8TAP4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 AC190387.1-201ENST00000551683 408 ntBASIC16.41■□□□□ 0.22
LMO3Q8TAP4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 WFDC1-204ENST00000613603 549 ntBASIC16.41■□□□□ 0.22
LMO3Q8TAP4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMO3Q8TAP4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 AC007292.2-201ENST00000593524 1812 ntBASIC16.4■□□□□ 0.22
LMO3Q8TAP4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 KRT8P14-201ENST00000414254 1442 ntBASIC16.4■□□□□ 0.22
LMO3Q8TAP4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 MTHFR-210ENST00000641407 2387 ntBASIC16.4■□□□□ 0.22
LMO3Q8TAP4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 RNU1-114P-201ENST00000365297 166 ntBASIC16.4■□□□□ 0.22
LMO3Q8TAP4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 TP53TG3HP-202ENST00000569755 579 ntBASIC16.4■□□□□ 0.22
LMO3Q8TAP4 CLUHP6-201ENST00000580789 941 ntBASIC16.4■□□□□ 0.22
LMO3Q8TAP4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LMO3Q8TAP4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
LMO3Q8TAP4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 AC140479.7-201ENST00000636301 2332 ntBASIC16.39■□□□□ 0.21
LMO3Q8TAP4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 SOCS2P1-201ENST00000417727 557 ntBASIC16.39■□□□□ 0.21
LMO3Q8TAP4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 AP001582.1-201ENST00000525856 295 ntBASIC16.39■□□□□ 0.21
LMO3Q8TAP4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 AC133539.2-201ENST00000604757 467 ntBASIC16.39■□□□□ 0.21
LMO3Q8TAP4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 RPSAP52-203ENST00000622976 1023 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms