Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 CYP4F24P-201ENST00000586049 1580 ntBASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 CICP14-201ENST00000629111 2732 ntBASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 BANF1P1-201ENST00000553684 263 ntBASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 AC041040.2-201ENST00000622926 2899 ntBASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.71■□□□□ 0.11
CFAP61Q8NHU2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CFAP61Q8NHU2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.71■□□□□ 0.1
CFAP61Q8NHU2 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CFAP61Q8NHU2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.1
CFAP61Q8NHU2 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CFAP61Q8NHU2 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CFAP61Q8NHU2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CFAP61Q8NHU2 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CFAP61Q8NHU2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.71■□□□□ 0.1
CFAP61Q8NHU2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.71■□□□□ 0.1
CFAP61Q8NHU2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.71■□□□□ 0.1
CFAP61Q8NHU2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CFAP61Q8NHU2 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 AL589739.1-201ENST00000607720 493 ntBASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 AL035456.1-201ENST00000456064 1369 ntBASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP61Q8NHU2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms