Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 IFNL4P1-201ENST00000607083 540 ntBASIC13.39□□□□□ -0.27
BEST4Q8NFU0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 AC027612.1-201ENST00000445234 2395 ntBASIC13.39□□□□□ -0.27
BEST4Q8NFU0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BEST4Q8NFU0 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 AL645939.2-201ENST00000427340 991 ntBASIC13.38□□□□□ -0.27
BEST4Q8NFU0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 VN2R19P-201ENST00000442399 1052 ntBASIC13.38□□□□□ -0.27
BEST4Q8NFU0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 MIR4313-201ENST00000580760 101 ntBASIC13.38□□□□□ -0.27
BEST4Q8NFU0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 AC092135.3-201ENST00000624151 1846 ntBASIC13.38□□□□□ -0.27
BEST4Q8NFU0 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 AL691432.1-201ENST00000596308 1422 ntBASIC13.38□□□□□ -0.27
BEST4Q8NFU0 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BEST4Q8NFU0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 BNIP3P1-202ENST00000550043 1585 ntBASIC13.37□□□□□ -0.27
BEST4Q8NFU0 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BEST4Q8NFU0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms