Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VRK2Q86Y07 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 LINC00552-201ENST00000625151 2579 ntBASIC14.27□□□□□ -0.13
VRK2Q86Y07 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 IGHV3-42-201ENST00000520410 361 ntBASIC14.27□□□□□ -0.13
VRK2Q86Y07 DUX4L27-201ENST00000554796 1261 ntBASIC14.27□□□□□ -0.13
VRK2Q86Y07 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 AC004461.2-201ENST00000629517 803 ntBASIC14.27□□□□□ -0.13
VRK2Q86Y07 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 REXO1L4P-201ENST00000605109 1937 ntBASIC14.27□□□□□ -0.13
VRK2Q86Y07 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.27□□□□□ -0.13
VRK2Q86Y07 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VRK2Q86Y07 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 FAM45BP-202ENST00000592932 1624 ntBASIC14.26□□□□□ -0.13
VRK2Q86Y07 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 AL009178.2-201ENST00000597278 2719 ntBASIC14.26□□□□□ -0.13
VRK2Q86Y07 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.26□□□□□ -0.13
VRK2Q86Y07 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 METTL21AP1-201ENST00000438852 635 ntBASIC14.26□□□□□ -0.13
VRK2Q86Y07 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 AC011467.4-201ENST00000594891 528 ntBASIC14.26□□□□□ -0.13
VRK2Q86Y07 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.26□□□□□ -0.13
VRK2Q86Y07 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VRK2Q86Y07 AL390755.1-201ENST00000623716 2027 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms