Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 AL442647.2-201ENST00000429864 857 ntBASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 RN7SL692P-201ENST00000464677 288 ntBASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 RPL13AP25-201ENST00000484130 612 ntBASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 GAPDHP40-201ENST00000505218 1006 ntBASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 AC026410.3-201ENST00000514280 936 ntBASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 AL596325.1-201ENST00000563991 1082 ntBASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LYSMD3Q7Z3D4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 AC134915.1-201ENST00000426461 574 ntBASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 AL359711.2-201ENST00000563105 872 ntBASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 AC120045.2-201ENST00000567334 178 ntBASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 WFDC1-204ENST00000613603 549 ntBASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 AC126365.1-201ENST00000578585 1514 ntBASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LYSMD3Q7Z3D4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 AC098614.1-201ENST00000368528 745 ntBASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.47■□□□□ 0.07
LYSMD3Q7Z3D4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms