Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.85■□□□□ 0.45
PDZRN4Q6ZMN7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 AL356585.2-201ENST00000625078 2396 ntBASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 USP31-203ENST00000567975 2142 ntTSL 2 BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 AC051619.7-201ENST00000568314 623 ntBASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 AC027307.2-201ENST00000591252 911 ntBASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 AC005498.2-205ENST00000593218 784 ntBASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 HSPA7-201ENST00000445535 1927 ntBASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDZRN4Q6ZMN7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PDZRN4Q6ZMN7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDZRN4Q6ZMN7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PDZRN4Q6ZMN7 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC17.83■□□□□ 0.45
PDZRN4Q6ZMN7 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDZRN4Q6ZMN7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
PDZRN4Q6ZMN7 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
PDZRN4Q6ZMN7 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
PDZRN4Q6ZMN7 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDZRN4Q6ZMN7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
PDZRN4Q6ZMN7 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDZRN4Q6ZMN7 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDZRN4Q6ZMN7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 AC026150.2-201ENST00000564693 1156 ntBASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 AP000842.3-202ENST00000569238 1080 ntBASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 AL096865.1-201ENST00000606796 927 ntBASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 SNX33P1-201ENST00000592116 1762 ntBASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDZRN4Q6ZMN7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.82■□□□□ 0.44
PDZRN4Q6ZMN7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDZRN4Q6ZMN7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms