Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.84■□□□□ 0.61
ATP2B3Q16720 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2B3Q16720 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2B3Q16720 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2B3Q16720 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2B3Q16720 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2B3Q16720 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
ATP2B3Q16720 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.84■□□□□ 0.61
ATP2B3Q16720 AC020658.6-201ENST00000623564 1870 ntBASIC18.84■□□□□ 0.61
ATP2B3Q16720 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2B3Q16720 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2B3Q16720 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.83■□□□□ 0.61
ATP2B3Q16720 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2B3Q16720 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2B3Q16720 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2B3Q16720 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2B3Q16720 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ATP2B3Q16720 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
ATP2B3Q16720 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2B3Q16720 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2B3Q16720 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2B3Q16720 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2B3Q16720 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ATP2B3Q16720 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2B3Q16720 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2B3Q16720 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ATP2B3Q16720 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2B3Q16720 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ATP2B3Q16720 AL139094.1-201ENST00000405549 1188 ntBASIC18.83■□□□□ 0.6
ATP2B3Q16720 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.83■□□□□ 0.6
ATP2B3Q16720 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2B3Q16720 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.83■□□□□ 0.6
ATP2B3Q16720 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2B3Q16720 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.83■□□□□ 0.6
ATP2B3Q16720 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.83■□□□□ 0.6
ATP2B3Q16720 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.83■□□□□ 0.6
ATP2B3Q16720 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2B3Q16720 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ATP2B3Q16720 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2B3Q16720 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2B3Q16720 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2B3Q16720 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2B3Q16720 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ATP2B3Q16720 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.83■□□□□ 0.6
ATP2B3Q16720 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP2B3Q16720 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 AL645937.2-201ENST00000396808 931 ntBASIC18.82■□□□□ 0.6
ATP2B3Q16720 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP2B3Q16720 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.82■□□□□ 0.6
ATP2B3Q16720 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.82■□□□□ 0.6
ATP2B3Q16720 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP2B3Q16720 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP2B3Q16720 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
ATP2B3Q16720 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ATP2B3Q16720 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ATP2B3Q16720 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ATP2B3Q16720 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
ATP2B3Q16720 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ATP2B3Q16720 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP2B3Q16720 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP2B3Q16720 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ATP2B3Q16720 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2B3Q16720 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 CICP11-201ENST00000434745 2827 ntBASIC18.81■□□□□ 0.6
ATP2B3Q16720 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 AC104457.1-201ENST00000401024 814 ntBASIC18.81■□□□□ 0.6
ATP2B3Q16720 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2B3Q16720 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 FO681548.1-201ENST00000455617 1132 ntBASIC18.81■□□□□ 0.6
ATP2B3Q16720 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.81■□□□□ 0.6
ATP2B3Q16720 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms