Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.83□□□□□ -0.2
SCN1BQ07699 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.82□□□□□ -0.2
SCN1BQ07699 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN1BQ07699 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.82□□□□□ -0.2
SCN1BQ07699 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN1BQ07699 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.82□□□□□ -0.2
SCN1BQ07699 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN1BQ07699 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.82□□□□□ -0.2
SCN1BQ07699 DGCR9-201ENST00000609630 2415 ntBASIC13.82□□□□□ -0.2
SCN1BQ07699 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCN1BQ07699 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.82□□□□□ -0.2
SCN1BQ07699 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCN1BQ07699 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.82□□□□□ -0.2
SCN1BQ07699 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.82□□□□□ -0.2
SCN1BQ07699 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN1BQ07699 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SCN1BQ07699 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCN1BQ07699 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCN1BQ07699 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.82□□□□□ -0.2
SCN1BQ07699 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.82□□□□□ -0.2
SCN1BQ07699 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SCN1BQ07699 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN1BQ07699 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.82□□□□□ -0.2
SCN1BQ07699 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.82□□□□□ -0.2
SCN1BQ07699 RPL13AP23-201ENST00000480739 586 ntBASIC13.82□□□□□ -0.2
SCN1BQ07699 KRT18P34-201ENST00000488218 1270 ntBASIC13.82□□□□□ -0.2
SCN1BQ07699 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.82□□□□□ -0.2
SCN1BQ07699 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SCN1BQ07699 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.82□□□□□ -0.2
SCN1BQ07699 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.82□□□□□ -0.2
SCN1BQ07699 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.82□□□□□ -0.2
SCN1BQ07699 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.82□□□□□ -0.2
SCN1BQ07699 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCN1BQ07699 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN1BQ07699 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCN1BQ07699 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SCN1BQ07699 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCN1BQ07699 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.82□□□□□ -0.2
SCN1BQ07699 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN1BQ07699 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SCN1BQ07699 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SCN1BQ07699 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SCN1BQ07699 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SCN1BQ07699 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.82□□□□□ -0.2
SCN1BQ07699 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.82□□□□□ -0.2
SCN1BQ07699 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SCN1BQ07699 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SCN1BQ07699 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.81□□□□□ -0.2
SCN1BQ07699 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.81□□□□□ -0.2
SCN1BQ07699 AL122018.1-201ENST00000446607 2310 ntBASIC13.81□□□□□ -0.2
SCN1BQ07699 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SCN1BQ07699 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
SCN1BQ07699 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
SCN1BQ07699 DMBT1P1-203ENST00000636837 4628 ntBASIC13.81□□□□□ -0.2
SCN1BQ07699 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SCN1BQ07699 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.81□□□□□ -0.2
SCN1BQ07699 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SCN1BQ07699 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
SCN1BQ07699 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SCN1BQ07699 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.81□□□□□ -0.2
SCN1BQ07699 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.81□□□□□ -0.2
SCN1BQ07699 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.81□□□□□ -0.2
SCN1BQ07699 AL009183.1-201ENST00000603760 355 ntBASIC13.81□□□□□ -0.2
SCN1BQ07699 AC064836.3-201ENST00000607928 673 ntBASIC13.81□□□□□ -0.2
SCN1BQ07699 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.81□□□□□ -0.2
SCN1BQ07699 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.81□□□□□ -0.2
SCN1BQ07699 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SCN1BQ07699 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SCN1BQ07699 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.81□□□□□ -0.2
SCN1BQ07699 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
SCN1BQ07699 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
SCN1BQ07699 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.81□□□□□ -0.2
SCN1BQ07699 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.81□□□□□ -0.2
SCN1BQ07699 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SCN1BQ07699 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN1BQ07699 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN1BQ07699 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN1BQ07699 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms