Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.58□□□□□ -0.08
RAE1P78406 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAE1P78406 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAE1P78406 AC140479.7-201ENST00000636301 2332 ntBASIC14.58□□□□□ -0.08
RAE1P78406 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RAE1P78406 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAE1P78406 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAE1P78406 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAE1P78406 SPDYE19P-201ENST00000338590 713 ntBASIC14.58□□□□□ -0.08
RAE1P78406 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RAE1P78406 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAE1P78406 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAE1P78406 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.58□□□□□ -0.08
RAE1P78406 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.58□□□□□ -0.08
RAE1P78406 UGT1A2P-201ENST00000454886 866 ntBASIC14.58□□□□□ -0.08
RAE1P78406 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.58□□□□□ -0.08
RAE1P78406 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAE1P78406 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.58□□□□□ -0.08
RAE1P78406 AC036164.1-201ENST00000570544 333 ntBASIC14.58□□□□□ -0.08
RAE1P78406 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.58□□□□□ -0.08
RAE1P78406 AL049840.4-201ENST00000602422 811 ntBASIC14.58□□□□□ -0.08
RAE1P78406 AC107373.2-201ENST00000607735 490 ntBASIC14.58□□□□□ -0.08
RAE1P78406 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RAE1P78406 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAE1P78406 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAE1P78406 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAE1P78406 AC018529.2-202ENST00000611482 3087 ntBASIC14.58□□□□□ -0.08
RAE1P78406 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.58□□□□□ -0.08
RAE1P78406 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAE1P78406 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.58□□□□□ -0.08
RAE1P78406 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RAE1P78406 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.58□□□□□ -0.08
RAE1P78406 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RAE1P78406 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAE1P78406 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
RAE1P78406 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAE1P78406 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.58□□□□□ -0.08
RAE1P78406 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAE1P78406 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAE1P78406 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAE1P78406 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.57□□□□□ -0.08
RAE1P78406 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RAE1P78406 AC007686.3-201ENST00000619017 3487 ntBASIC14.57□□□□□ -0.08
RAE1P78406 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.57□□□□□ -0.08
RAE1P78406 AL136379.1-201ENST00000623471 2642 ntBASIC14.57□□□□□ -0.08
RAE1P78406 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.57□□□□□ -0.08
RAE1P78406 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.57□□□□□ -0.08
RAE1P78406 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 HLA-K-203ENST00000430151 1046 ntBASIC14.57□□□□□ -0.08
RAE1P78406 AL353779.1-201ENST00000434793 351 ntBASIC14.57□□□□□ -0.08
RAE1P78406 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.57□□□□□ -0.08
RAE1P78406 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.57□□□□□ -0.08
RAE1P78406 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.57□□□□□ -0.08
RAE1P78406 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.57□□□□□ -0.08
RAE1P78406 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.57□□□□□ -0.08
RAE1P78406 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 MTHFR-210ENST00000641407 2387 ntBASIC14.57□□□□□ -0.08
RAE1P78406 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.57□□□□□ -0.08
RAE1P78406 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.57□□□□□ -0.08
RAE1P78406 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RAE1P78406 AC007191.1-201ENST00000623179 2995 ntBASIC14.57□□□□□ -0.08
RAE1P78406 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RAE1P78406 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RAE1P78406 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 AL009178.2-201ENST00000597278 2719 ntBASIC14.57□□□□□ -0.08
RAE1P78406 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAE1P78406 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RAE1P78406 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RAE1P78406 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAE1P78406 AC005912.2-201ENST00000619492 2400 ntBASIC14.56□□□□□ -0.08
RAE1P78406 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
RAE1P78406 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAE1P78406 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 AC018442.1-201ENST00000421439 2061 ntBASIC14.56□□□□□ -0.08
RAE1P78406 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.56□□□□□ -0.08
RAE1P78406 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.56□□□□□ -0.08
RAE1P78406 AL138799.1-201ENST00000448213 1675 ntBASIC14.56□□□□□ -0.08
RAE1P78406 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RAE1P78406 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAE1P78406 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms