Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.63□□□□□ -0.39
SPCS3P61009 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.63□□□□□ -0.39
SPCS3P61009 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SPCS3P61009 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.63□□□□□ -0.39
SPCS3P61009 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.63□□□□□ -0.39
SPCS3P61009 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.63□□□□□ -0.39
SPCS3P61009 TFAMP1-201ENST00000412727 736 ntBASIC12.63□□□□□ -0.39
SPCS3P61009 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.63□□□□□ -0.39
SPCS3P61009 AC007967.2-201ENST00000432613 625 ntBASIC12.63□□□□□ -0.39
SPCS3P61009 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
SPCS3P61009 RN7SL589P-201ENST00000481268 310 ntBASIC12.63□□□□□ -0.39
SPCS3P61009 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.63□□□□□ -0.39
SPCS3P61009 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.63□□□□□ -0.39
SPCS3P61009 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.63□□□□□ -0.39
SPCS3P61009 AL135744.1-201ENST00000565098 629 ntBASIC12.63□□□□□ -0.39
SPCS3P61009 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SPCS3P61009 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.63□□□□□ -0.39
SPCS3P61009 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.63□□□□□ -0.39
SPCS3P61009 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SPCS3P61009 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.63□□□□□ -0.39
SPCS3P61009 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.63□□□□□ -0.39
SPCS3P61009 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SPCS3P61009 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SPCS3P61009 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS3P61009 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.62□□□□□ -0.39
SPCS3P61009 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SPCS3P61009 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SPCS3P61009 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
SPCS3P61009 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
SPCS3P61009 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.62□□□□□ -0.39
SPCS3P61009 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.62□□□□□ -0.39
SPCS3P61009 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SPCS3P61009 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SPCS3P61009 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.62□□□□□ -0.39
SPCS3P61009 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.62□□□□□ -0.39
SPCS3P61009 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 AL355306.1-201ENST00000415580 579 ntBASIC12.62□□□□□ -0.39
SPCS3P61009 AL450487.1-201ENST00000426799 995 ntBASIC12.62□□□□□ -0.39
SPCS3P61009 FAM8A3P-201ENST00000427218 844 ntBASIC12.62□□□□□ -0.39
SPCS3P61009 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.62□□□□□ -0.39
SPCS3P61009 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.62□□□□□ -0.39
SPCS3P61009 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.62□□□□□ -0.39
SPCS3P61009 HNRNPUP1-201ENST00000554987 333 ntBASIC12.62□□□□□ -0.39
SPCS3P61009 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.62□□□□□ -0.39
SPCS3P61009 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.62□□□□□ -0.39
SPCS3P61009 AC097359.3-201ENST00000603982 1210 ntBASIC12.62□□□□□ -0.39
SPCS3P61009 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.62□□□□□ -0.39
SPCS3P61009 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.62□□□□□ -0.39
SPCS3P61009 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.62□□□□□ -0.39
SPCS3P61009 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.62□□□□□ -0.39
SPCS3P61009 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.62□□□□□ -0.39
SPCS3P61009 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.62□□□□□ -0.39
SPCS3P61009 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.62□□□□□ -0.39
SPCS3P61009 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.62□□□□□ -0.39
SPCS3P61009 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SPCS3P61009 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS3P61009 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.62□□□□□ -0.39
SPCS3P61009 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms