Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.36□□□□□ -0.11
PER3P56645 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.36□□□□□ -0.11
PER3P56645 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PER3P56645 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PER3P56645 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PER3P56645 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PER3P56645 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 FAM21FP-201ENST00000426241 1131 ntBASIC14.36□□□□□ -0.11
PER3P56645 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PER3P56645 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
PER3P56645 AL162726.2-201ENST00000438986 1017 ntBASIC14.36□□□□□ -0.11
PER3P56645 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.36□□□□□ -0.11
PER3P56645 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.36□□□□□ -0.11
PER3P56645 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.36□□□□□ -0.11
PER3P56645 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 RARRES2P5-201ENST00000564013 466 ntBASIC14.36□□□□□ -0.11
PER3P56645 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.36□□□□□ -0.11
PER3P56645 AC103810.3-201ENST00000583567 96 ntBASIC14.36□□□□□ -0.11
PER3P56645 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.36□□□□□ -0.11
PER3P56645 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.36□□□□□ -0.11
PER3P56645 MIR4321-201ENST00000592276 80 ntBASIC14.36□□□□□ -0.11
PER3P56645 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.36□□□□□ -0.11
PER3P56645 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PER3P56645 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PER3P56645 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.36□□□□□ -0.11
PER3P56645 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.36□□□□□ -0.11
PER3P56645 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PER3P56645 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.36□□□□□ -0.11
PER3P56645 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PER3P56645 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.36□□□□□ -0.11
PER3P56645 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
PER3P56645 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PER3P56645 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PER3P56645 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
PER3P56645 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PER3P56645 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.35□□□□□ -0.11
PER3P56645 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.35□□□□□ -0.11
PER3P56645 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PER3P56645 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.35□□□□□ -0.11
PER3P56645 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.35□□□□□ -0.11
PER3P56645 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.35□□□□□ -0.11
PER3P56645 HAUS4P1-201ENST00000406739 1145 ntBASIC14.35□□□□□ -0.11
PER3P56645 AL355994.2-201ENST00000447882 704 ntBASIC14.35□□□□□ -0.11
PER3P56645 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.35□□□□□ -0.11
PER3P56645 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.35□□□□□ -0.11
PER3P56645 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.35□□□□□ -0.11
PER3P56645 SNX29P1-201ENST00000548357 1007 ntBASIC14.35□□□□□ -0.11
PER3P56645 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.35□□□□□ -0.11
PER3P56645 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.35□□□□□ -0.11
PER3P56645 MIR4538-201ENST00000581377 78 ntBASIC14.35□□□□□ -0.11
PER3P56645 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.35□□□□□ -0.11
PER3P56645 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PER3P56645 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.35□□□□□ -0.11
PER3P56645 AL022328.1-201ENST00000610050 478 ntBASIC14.35□□□□□ -0.11
PER3P56645 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PER3P56645 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PER3P56645 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
PER3P56645 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms