Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDH15P55291 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH15P55291 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
CDH15P55291 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
CDH15P55291 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 AC126335.2-201ENST00000623362 4637 ntBASIC14.47□□□□□ -0.09
CDH15P55291 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CDH15P55291 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CDH15P55291 CRYGEP-201ENST00000412192 528 ntBASIC14.47□□□□□ -0.09
CDH15P55291 HCG4-201ENST00000418983 998 ntBASIC14.47□□□□□ -0.09
CDH15P55291 RPS8P6-201ENST00000426177 609 ntBASIC14.47□□□□□ -0.09
CDH15P55291 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH15P55291 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH15P55291 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH15P55291 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH15P55291 MIR4751-201ENST00000578027 74 ntBASIC14.47□□□□□ -0.09
CDH15P55291 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.47□□□□□ -0.09
CDH15P55291 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH15P55291 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH15P55291 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH15P55291 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CDH15P55291 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH15P55291 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH15P55291 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CDH15P55291 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH15P55291 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH15P55291 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH15P55291 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH15P55291 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH15P55291 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH15P55291 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH15P55291 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH15P55291 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH15P55291 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH15P55291 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH15P55291 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH15P55291 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CDH15P55291 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CDH15P55291 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH15P55291 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CDH15P55291 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH15P55291 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.46□□□□□ -0.09
CDH15P55291 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH15P55291 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH15P55291 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CDH15P55291 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.46□□□□□ -0.09
CDH15P55291 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CDH15P55291 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH15P55291 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH15P55291 AC108073.2-201ENST00000464002 357 ntBASIC14.46□□□□□ -0.09
CDH15P55291 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH15P55291 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.46□□□□□ -0.09
CDH15P55291 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH15P55291 AC134684.3-201ENST00000641758 218 ntBASIC14.46□□□□□ -0.09
CDH15P55291 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH15P55291 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH15P55291 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CDH15P55291 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CDH15P55291 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDH15P55291 AC105206.1-202ENST00000314927 2368 ntBASIC14.46□□□□□ -0.1
CDH15P55291 PPT1-213ENST00000641319 2388 ntBASIC14.46□□□□□ -0.1
CDH15P55291 AC152010.1-201ENST00000415779 2006 ntBASIC14.46□□□□□ -0.1
CDH15P55291 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH15P55291 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDH15P55291 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CDH15P55291 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CDH15P55291 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH15P55291 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH15P55291 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH15P55291 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDH15P55291 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH15P55291 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDH15P55291 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH15P55291 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH15P55291 AC011474.4-201ENST00000623523 2076 ntBASIC14.45□□□□□ -0.1
CDH15P55291 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH15P55291 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms