Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
GTF2A1P52655 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC15.17■□□□□ 0.02
GTF2A1P52655 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
GTF2A1P52655 STRCP1-201ENST00000509801 5328 ntBASIC15.17■□□□□ 0.02
GTF2A1P52655 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.17■□□□□ 0.02
GTF2A1P52655 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
GTF2A1P52655 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.17■□□□□ 0.02
GTF2A1P52655 AL359075.1-203ENST00000462729 1002 ntBASIC15.17■□□□□ 0.02
GTF2A1P52655 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
GTF2A1P52655 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.17■□□□□ 0.02
GTF2A1P52655 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.17■□□□□ 0.02
GTF2A1P52655 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC15.17■□□□□ 0.02
GTF2A1P52655 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
GTF2A1P52655 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
GTF2A1P52655 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
GTF2A1P52655 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 Z83836.1-201ENST00000624605 1642 ntBASIC15.17■□□□□ 0.02
GTF2A1P52655 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.17■□□□□ 0.02
GTF2A1P52655 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.17■□□□□ 0.02
GTF2A1P52655 AC027020.2-201ENST00000602585 2389 ntBASIC15.17■□□□□ 0.02
GTF2A1P52655 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
GTF2A1P52655 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
GTF2A1P52655 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.17■□□□□ 0.02
GTF2A1P52655 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.16■□□□□ 0.02
GTF2A1P52655 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.16■□□□□ 0.02
GTF2A1P52655 AC010536.1-201ENST00000538868 2611 ntBASIC15.16■□□□□ 0.02
GTF2A1P52655 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GTF2A1P52655 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.16■□□□□ 0.02
GTF2A1P52655 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
GTF2A1P52655 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
GTF2A1P52655 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.16■□□□□ 0.02
GTF2A1P52655 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
GTF2A1P52655 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GTF2A1P52655 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GTF2A1P52655 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GTF2A1P52655 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
GTF2A1P52655 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GTF2A1P52655 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
GTF2A1P52655 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.16■□□□□ 0.02
GTF2A1P52655 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GTF2A1P52655 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.16■□□□□ 0.02
GTF2A1P52655 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GTF2A1P52655 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.16■□□□□ 0.02
GTF2A1P52655 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.16■□□□□ 0.02
GTF2A1P52655 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
GTF2A1P52655 AC111152.3-201ENST00000569699 673 ntBASIC15.16■□□□□ 0.02
GTF2A1P52655 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.16■□□□□ 0.02
GTF2A1P52655 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.16■□□□□ 0.02
GTF2A1P52655 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
GTF2A1P52655 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
GTF2A1P52655 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.16■□□□□ 0.02
GTF2A1P52655 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC15.16■□□□□ 0.02
GTF2A1P52655 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GTF2A1P52655 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.16■□□□□ 0.02
GTF2A1P52655 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GTF2A1P52655 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GTF2A1P52655 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
GTF2A1P52655 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.16■□□□□ 0.02
GTF2A1P52655 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC15.16■□□□□ 0.02
GTF2A1P52655 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
GTF2A1P52655 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GTF2A1P52655 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
GTF2A1P52655 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
GTF2A1P52655 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
GTF2A1P52655 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.16■□□□□ 0.02
GTF2A1P52655 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GTF2A1P52655 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
GTF2A1P52655 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.15■□□□□ 0.02
GTF2A1P52655 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.15■□□□□ 0.02
GTF2A1P52655 AP002761.4-201ENST00000565433 3361 ntBASIC15.15■□□□□ 0.02
GTF2A1P52655 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GTF2A1P52655 AL022323.5-201ENST00000624101 2059 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms