Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC084752.1-201ENST00000509766 622 ntBASIC21.16■□□□□ 0.98
CPS1P31327 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC21.16■□□□□ 0.98
CPS1P31327 AC005962.1-201ENST00000584100 773 ntBASIC21.16■□□□□ 0.98
CPS1P31327 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CPS1P31327 MIR6769A-201ENST00000617340 73 ntBASIC21.16■□□□□ 0.98
CPS1P31327 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPS1P31327 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPS1P31327 AL157414.3-201ENST00000624276 1954 ntBASIC21.16■□□□□ 0.98
CPS1P31327 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CPS1P31327 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPS1P31327 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPS1P31327 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPS1P31327 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPS1P31327 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CPS1P31327 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPS1P31327 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPS1P31327 STK16-203ENST00000409516 895 ntTSL 2 BASIC21.15■□□□□ 0.98
CPS1P31327 AC004522.1-201ENST00000419978 654 ntBASIC21.15■□□□□ 0.98
CPS1P31327 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC21.15■□□□□ 0.98
CPS1P31327 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC21.15■□□□□ 0.98
CPS1P31327 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC21.15■□□□□ 0.98
CPS1P31327 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC21.15■□□□□ 0.98
CPS1P31327 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPS1P31327 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC21.15■□□□□ 0.98
CPS1P31327 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPS1P31327 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPS1P31327 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC21.15■□□□□ 0.98
CPS1P31327 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPS1P31327 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CPS1P31327 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CPS1P31327 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPS1P31327 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPS1P31327 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPS1P31327 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPS1P31327 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPS1P31327 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC21.15■□□□□ 0.98
CPS1P31327 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPS1P31327 CYP2T1P-202ENST00000641596 2535 ntBASIC21.15■□□□□ 0.98
CPS1P31327 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC21.15■□□□□ 0.98
CPS1P31327 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPS1P31327 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CPS1P31327 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CPS1P31327 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPS1P31327 RN7SKP230-201ENST00000365642 335 ntBASIC21.14■□□□□ 0.98
CPS1P31327 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
CPS1P31327 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CPS1P31327 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CPS1P31327 FTH1P22-201ENST00000456305 520 ntBASIC21.14■□□□□ 0.98
CPS1P31327 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC21.14■□□□□ 0.98
CPS1P31327 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC21.14■□□□□ 0.98
CPS1P31327 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC21.14■□□□□ 0.98
CPS1P31327 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
CPS1P31327 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CPS1P31327 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CPS1P31327 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CPS1P31327 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPS1P31327 PCDH8P1-201ENST00000428983 2773 ntBASIC21.14■□□□□ 0.98
CPS1P31327 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CPS1P31327 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPS1P31327 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPS1P31327 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC21.14■□□□□ 0.97
CPS1P31327 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPS1P31327 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPS1P31327 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPS1P31327 KRT8P31-201ENST00000504812 1408 ntBASIC21.14■□□□□ 0.97
CPS1P31327 LINC01815-202ENST00000641468 1409 ntBASIC21.14■□□□□ 0.97
CPS1P31327 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPS1P31327 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPS1P31327 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPS1P31327 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPS1P31327 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPS1P31327 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPS1P31327 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC21.14■□□□□ 0.97
CPS1P31327 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPS1P31327 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPS1P31327 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC21.14■□□□□ 0.97
CPS1P31327 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPS1P31327 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC21.14■□□□□ 0.97
CPS1P31327 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC21.14■□□□□ 0.97
CPS1P31327 SERBP1P2-201ENST00000436888 1164 ntBASIC21.14■□□□□ 0.97
CPS1P31327 AL354861.1-201ENST00000445213 355 ntBASIC21.14■□□□□ 0.97
CPS1P31327 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CPS1P31327 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CPS1P31327 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CPS1P31327 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPS1P31327 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC21.14■□□□□ 0.97
CPS1P31327 PEBP1P2-201ENST00000603980 558 ntBASIC21.14■□□□□ 0.97
CPS1P31327 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC21.14■□□□□ 0.97
CPS1P31327 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPS1P31327 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CPS1P31327 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPS1P31327 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPS1P31327 ZBTB45P1-201ENST00000452761 1456 ntBASIC21.13■□□□□ 0.97
CPS1P31327 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CPS1P31327 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPS1P31327 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPS1P31327 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC21.13■□□□□ 0.97
CPS1P31327 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPS1P31327 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC21.13■□□□□ 0.97
CPS1P31327 AL645933.1-201ENST00000440087 609 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms