Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 UBXN7-202ENST00000381887 375 ntTSL 33.58□□□□□ -1.841e-8■■□□□ 14.2
U2AF2P26368 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.43□□□□□ -1.861e-8■■□□□ 14.2
U2AF2P26368 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.55e-8■■□□□ 14.2
U2AF2P26368 HERPUD1-219ENST00000570273 1425 ntTSL 1 (best)17.68■□□□□ 0.425e-8■■□□□ 14.2
U2AF2P26368 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.18■□□□□ 0.185e-8■■□□□ 14.2
U2AF2P26368 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.128e-8■■□□□ 14.2
U2AF2P26368 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC15.43■□□□□ 0.065e-8■■□□□ 14.2
U2AF2P26368 HERPUD1-216ENST00000568814 509 ntTSL 211.68□□□□□ -0.548e-14■■□□□ 14.2
U2AF2P26368 HERPUD1-209ENST00000564678 2199 ntTSL 1 (best)8.38□□□□□ -1.075e-10■■□□□ 14.2
U2AF2P26368 HERPUD1-214ENST00000568651 458 ntTSL 36.35□□□□□ -1.396e-14■■□□□ 14.2
U2AF2P26368 HERPUD1-208ENST00000563911 844 ntTSL 36.11□□□□□ -1.434e-14■■□□□ 14.2
U2AF2P26368 HERPUD1-213ENST00000568358 751 ntTSL 55.11□□□□□ -1.594e-10■■□□□ 14.2
U2AF2P26368 TTLL4-221ENST00000494428 829 ntTSL 38.51□□□□□ -1.051e-6■■□□□ 14.2
U2AF2P26368 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.883e-8■■□□□ 14.2
U2AF2P26368 PTCD3-208ENST00000469585 885 ntTSL 26.84□□□□□ -1.319e-11■■□□□ 14.2
U2AF2P26368 PTCD3-216ENST00000487043 1054 ntTSL 33.83□□□□□ -1.82e-8■■□□□ 14.2
U2AF2P26368 PTCD3-205ENST00000464541 890 ntTSL 53.66□□□□□ -1.821e-10■■□□□ 14.2
U2AF2P26368 PTCD3-211ENST00000476215 754 ntTSL 32.73□□□□□ -1.971e-10■■□□□ 14.2
U2AF2P26368 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.264e-6■■□□□ 14.2
U2AF2P26368 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.57■□□□□ 0.244e-6■■□□□ 14.2
U2AF2P26368 RPTOR-211ENST00000577161 3633 ntTSL 213.24□□□□□ -0.294e-6■■□□□ 14.2
U2AF2P26368 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.877e-9■■□□□ 14.2
U2AF2P26368 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.857e-9■■□□□ 14.2
U2AF2P26368 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.54■■□□□ 1.847e-9■■□□□ 14.2
U2AF2P26368 EGFL8-221ENST00000432129 825 ntTSL 522.39■■□□□ 1.177e-9■■□□□ 14.2
U2AF2P26368 PPT2-EGFL8-203ENST00000428388 2878 ntAPPRIS P5 TSL 219.34■□□□□ 0.697e-9■■□□□ 14.2
U2AF2P26368 EGFL8-224ENST00000489721 455 ntTSL 219.22■□□□□ 0.677e-9■■□□□ 14.2
U2AF2P26368 EGFL8-222ENST00000466239 2441 ntTSL 218.33■□□□□ 0.527e-9■■□□□ 14.2
U2AF2P26368 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.037e-9■■□□□ 14.2
U2AF2P26368 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.027e-9■■□□□ 14.2
U2AF2P26368 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC8.17□□□□□ -1.17e-9■■□□□ 14.2
U2AF2P26368 LSM8-202ENST00000411938 290 ntTSL 37.57□□□□□ -1.27e-9■■□□□ 14.2
U2AF2P26368 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC10.22□□□□□ -0.771e-6■■□□□ 14.2
U2AF2P26368 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC16.72■□□□□ 0.272e-13■■□□□ 14.2
U2AF2P26368 BSCL2-221ENST00000530009 539 ntTSL 420.96■□□□□ 0.951e-9■■□□□ 14.2
U2AF2P26368 BSCL2-225ENST00000532818 662 ntTSL 217.03■□□□□ 0.321e-9■■□□□ 14.2
U2AF2P26368 BSCL2-214ENST00000464544 794 ntTSL 216.75■□□□□ 0.271e-9■■□□□ 14.2
U2AF2P26368 BSCL2-217ENST00000524862 865 ntTSL 516.75■□□□□ 0.271e-9■■□□□ 14.2
U2AF2P26368 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.051e-9■■□□□ 14.2
U2AF2P26368 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.081e-9■■□□□ 14.2
U2AF2P26368 BSCL2-202ENST00000301781 1712 ntTSL 513.73□□□□□ -0.211e-9■■□□□ 14.2
U2AF2P26368 BSCL2-220ENST00000528874 553 ntTSL 411.72□□□□□ -0.531e-9■■□□□ 14.2
U2AF2P26368 BSCL2-226ENST00000533982 585 ntTSL 58.67□□□□□ -1.021e-9■■□□□ 14.2
U2AF2P26368 BSCL2-209ENST00000413908 578 ntTSL 48.22□□□□□ -1.091e-9■■□□□ 14.2
U2AF2P26368 BSCL2-223ENST00000531524 844 ntTSL 35.39□□□□□ -1.551e-9■■□□□ 14.2
U2AF2P26368 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.88■■□□□ 1.411e-7■■□□□ 14.2
U2AF2P26368 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.05■□□□□ 0.481e-7■■□□□ 14.2
U2AF2P26368 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC9.64□□□□□ -0.871e-7■■□□□ 14.2
U2AF2P26368 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.425e-8■■□□□ 14.2
U2AF2P26368 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.135e-8■■□□□ 14.2
U2AF2P26368 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.085e-8■■□□□ 14.2
U2AF2P26368 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.025e-8■■□□□ 14.2
U2AF2P26368 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.995e-8■■□□□ 14.2
U2AF2P26368 FN3KRP-207ENST00000574832 1422 ntTSL 220.9■□□□□ 0.945e-8■■□□□ 14.2
U2AF2P26368 FN3KRP-206ENST00000574356 887 ntTSL 520.31■□□□□ 0.845e-8■■□□□ 14.2
U2AF2P26368 FN3KRP-204ENST00000573158 627 ntTSL 318.48■□□□□ 0.555e-8■■□□□ 14.2
U2AF2P26368 FN3KRP-205ENST00000574206 683 ntTSL 318.1■□□□□ 0.495e-8■■□□□ 14.2
U2AF2P26368 FN3KRP-209ENST00000577128 515 ntTSL 513.67□□□□□ -0.225e-8■■□□□ 14.2
U2AF2P26368 FBXW7-212ENST00000604872 970 ntTSL 1 (best) BASIC11.01□□□□□ -0.655e-8■■□□□ 14.2
U2AF2P26368 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.291e-6■■□□□ 14.2
U2AF2P26368 GTF2H4-205ENST00000483318 1082 ntTSL 222.07■■□□□ 1.126e-13■■□□□ 14.2
U2AF2P26368 RHOQ-207ENST00000489471 869 ntTSL 59.56□□□□□ -0.881e-6■■□□□ 14.2
U2AF2P26368 RHOQ-204ENST00000473428 757 ntTSL 36.31□□□□□ -1.41e-6■■□□□ 14.2
U2AF2P26368 RHOQ-206ENST00000489448 560 ntTSL 22.77□□□□□ -1.971e-6■■□□□ 14.2
U2AF2P26368 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.032e-6■■□□□ 14.2
U2AF2P26368 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.692e-6■■□□□ 14.2
U2AF2P26368 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.52e-6■■□□□ 14.2
U2AF2P26368 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC15.67■□□□□ 0.12e-6■■□□□ 14.2
U2AF2P26368 CLASP2-201ENST00000313350 1597 ntTSL 1 (best) BASIC13.45□□□□□ -0.262e-6■■□□□ 14.2
U2AF2P26368 CLASP2-202ENST00000333778 1989 ntTSL 2 BASIC11.95□□□□□ -0.52e-6■■□□□ 14.2
U2AF2P26368 UGT2B7-202ENST00000502942 866 ntTSL 210.17□□□□□ -0.782e-6■■□□□ 14.2
U2AF2P26368 UGT2B7-204ENST00000509763 744 ntTSL 54.62□□□□□ -1.672e-6■■□□□ 14.2
U2AF2P26368 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.582e-7■■□□□ 14.2
U2AF2P26368 FNDC3B-209ENST00000478016 554 ntTSL 43.61□□□□□ -1.831e-6■■□□□ 14.2
U2AF2P26368 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.66■□□□□ 0.743e-6■■□□□ 14.2
U2AF2P26368 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.28■□□□□ 0.683e-6■■□□□ 14.2
U2AF2P26368 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.02■□□□□ 0.473e-6■■□□□ 14.2
U2AF2P26368 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.88■□□□□ 0.293e-6■■□□□ 14.2
U2AF2P26368 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC15.82■□□□□ 0.123e-6■■□□□ 14.2
U2AF2P26368 MIER1-207ENST00000371018 3875 ntTSL 1 (best) BASIC13.77□□□□□ -0.23e-6■■□□□ 14.2
U2AF2P26368 MIER1-203ENST00000357692 4978 ntTSL 1 (best) BASIC13.57□□□□□ -0.243e-6■■□□□ 14.2
U2AF2P26368 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.823e-6■■□□□ 14.2
U2AF2P26368 MIER1-210ENST00000479067 745 ntTSL 53.03□□□□□ -1.923e-6■■□□□ 14.2
U2AF2P26368 EHBP1-215ENST00000469591 886 ntTSL 53.02□□□□□ -1.936e-7■■□□□ 14.2
U2AF2P26368 CCNB1IP1-206ENST00000437553 1686 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.153e-7■■□□□ 14.2
U2AF2P26368 CCNB1IP1-205ENST00000398169 1631 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.43e-7■■□□□ 14.2
U2AF2P26368 CCNB1IP1-203ENST00000398160 1613 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.483e-7■■□□□ 14.2
U2AF2P26368 CCNB1IP1-204ENST00000398163 1604 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.63e-7■■□□□ 14.2
U2AF2P26368 CCNB1IP1-202ENST00000358932 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.733e-7■■□□□ 14.2
U2AF2P26368 CCNB1IP1-201ENST00000353689 1305 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.813e-7■■□□□ 14.2
U2AF2P26368 CCNB1IP1-214ENST00000556854 1294 ntTSL 58.94□□□□□ -0.983e-7■■□□□ 14.2
U2AF2P26368 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.69□□□□□ -1.181e-6■■□□□ 14.2
U2AF2P26368 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.51e-6■■□□□ 14.2
U2AF2P26368 PDXDC1-214ENST00000566633 2597 ntTSL 212.45□□□□□ -0.422e-6■■□□□ 14.2
U2AF2P26368 PABPC1L-214ENST00000482486 541 ntTSL 211.36□□□□□ -0.592e-10■■□□□ 14.2
U2AF2P26368 PABPC1L-206ENST00000372822 536 ntTSL 57.59□□□□□ -1.192e-10■■□□□ 14.2
U2AF2P26368 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.35■□□□□ 0.051e-11■■□□□ 14.2
U2AF2P26368 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC14.67□□□□□ -0.061e-11■■□□□ 14.2
U2AF2P26368 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.45□□□□□ -1.541e-11■■□□□ 14.2
U2AF2P26368 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.17e-7■■□□□ 14.2
Retrieved 100 of 36,523 protein–RNA pairs in 211.7 ms