Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CHGBP05060 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.41■□□□□ 0.54
CHGBP05060 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.41■□□□□ 0.54
CHGBP05060 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.41■□□□□ 0.54
CHGBP05060 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.41■□□□□ 0.54
CHGBP05060 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.41■□□□□ 0.54
CHGBP05060 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.41■□□□□ 0.54
CHGBP05060 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.41■□□□□ 0.54
CHGBP05060 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
CHGBP05060 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CHGBP05060 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHGBP05060 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.4■□□□□ 0.54
CHGBP05060 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHGBP05060 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHGBP05060 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHGBP05060 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHGBP05060 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHGBP05060 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHGBP05060 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHGBP05060 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHGBP05060 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CHGBP05060 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.4■□□□□ 0.54
CHGBP05060 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHGBP05060 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHGBP05060 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.4■□□□□ 0.54
CHGBP05060 OR8S1-201ENST00000310194 1080 ntBASIC18.4■□□□□ 0.54
CHGBP05060 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHGBP05060 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.4■□□□□ 0.54
CHGBP05060 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.4■□□□□ 0.54
CHGBP05060 GK-202ENST00000378941 458 ntTSL 3 BASIC18.4■□□□□ 0.54
CHGBP05060 AL139094.1-201ENST00000405549 1188 ntBASIC18.4■□□□□ 0.54
CHGBP05060 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.4■□□□□ 0.54
CHGBP05060 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHGBP05060 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.4■□□□□ 0.54
CHGBP05060 AL590640.2-201ENST00000457038 527 ntBASIC18.4■□□□□ 0.54
CHGBP05060 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.4■□□□□ 0.54
CHGBP05060 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.4■□□□□ 0.54
CHGBP05060 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.4■□□□□ 0.54
CHGBP05060 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHGBP05060 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.4■□□□□ 0.54
CHGBP05060 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.4■□□□□ 0.54
CHGBP05060 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.4■□□□□ 0.54
CHGBP05060 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHGBP05060 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHGBP05060 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHGBP05060 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CHGBP05060 KRT8P35-201ENST00000483942 1338 ntBASIC18.4■□□□□ 0.54
CHGBP05060 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CHGBP05060 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CHGBP05060 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHGBP05060 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.4■□□□□ 0.54
CHGBP05060 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CHGBP05060 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.4■□□□□ 0.54
CHGBP05060 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CHGBP05060 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CHGBP05060 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CHGBP05060 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CHGBP05060 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHGBP05060 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.39■□□□□ 0.53
CHGBP05060 ACE3P-201ENST00000423435 1973 ntBASIC18.39■□□□□ 0.53
CHGBP05060 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.39■□□□□ 0.53
CHGBP05060 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CHGBP05060 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CHGBP05060 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
CHGBP05060 AC005229.1-201ENST00000392885 409 ntBASIC18.39■□□□□ 0.53
CHGBP05060 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.39■□□□□ 0.53
CHGBP05060 AC022210.1-201ENST00000449856 793 ntBASIC18.39■□□□□ 0.53
CHGBP05060 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CHGBP05060 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CHGBP05060 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 AC009486.1-201ENST00000569860 813 ntBASIC18.39■□□□□ 0.53
CHGBP05060 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.39■□□□□ 0.53
CHGBP05060 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.39■□□□□ 0.53
CHGBP05060 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CHGBP05060 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CHGBP05060 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.39■□□□□ 0.53
CHGBP05060 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHGBP05060 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms