Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.98□□□□□ -0.17
PPP1R3DO95685 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PPP1R3DO95685 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PPP1R3DO95685 INTS4P1-203ENST00000641008 3683 ntBASIC13.97□□□□□ -0.17
PPP1R3DO95685 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 SPDYE7P-202ENST00000420373 878 ntBASIC13.97□□□□□ -0.17
PPP1R3DO95685 BX842568.4-201ENST00000421222 227 ntBASIC13.97□□□□□ -0.17
PPP1R3DO95685 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 LINC00628-201ENST00000628516 1289 ntBASIC13.97□□□□□ -0.17
PPP1R3DO95685 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 REXO1L2P-201ENST00000425429 2069 ntBASIC13.97□□□□□ -0.17
PPP1R3DO95685 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PPP1R3DO95685 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
PPP1R3DO95685 AC005089.1-201ENST00000619486 2241 ntBASIC13.96□□□□□ -0.17
PPP1R3DO95685 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 UPF3AP3-201ENST00000420996 769 ntBASIC13.96□□□□□ -0.17
PPP1R3DO95685 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 SERBP1P3-201ENST00000459980 809 ntBASIC13.96□□□□□ -0.17
PPP1R3DO95685 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 AC025048.3-201ENST00000590609 569 ntBASIC13.96□□□□□ -0.17
PPP1R3DO95685 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 AC011467.4-201ENST00000594891 528 ntBASIC13.96□□□□□ -0.17
PPP1R3DO95685 AC005702.4-201ENST00000618393 416 ntBASIC13.96□□□□□ -0.17
PPP1R3DO95685 AP001059.3-201ENST00000619053 235 ntBASIC13.96□□□□□ -0.17
PPP1R3DO95685 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PPP1R3DO95685 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PPP1R3DO95685 AC007191.1-201ENST00000623179 2995 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms