Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NKX2-2O95096 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.19□□□□□ -0.14
NKX2-2O95096 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.19□□□□□ -0.14
NKX2-2O95096 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NKX2-2O95096 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NKX2-2O95096 AL158070.2-201ENST00000623713 1621 ntBASIC14.19□□□□□ -0.14
NKX2-2O95096 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NKX2-2O95096 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
NKX2-2O95096 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX2-2O95096 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NKX2-2O95096 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.18□□□□□ -0.14
NKX2-2O95096 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NKX2-2O95096 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NKX2-2O95096 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX2-2O95096 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX2-2O95096 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.18□□□□□ -0.14
NKX2-2O95096 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.18□□□□□ -0.14
NKX2-2O95096 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX2-2O95096 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX2-2O95096 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.18□□□□□ -0.14
NKX2-2O95096 AL359711.2-201ENST00000563105 872 ntBASIC14.18□□□□□ -0.14
NKX2-2O95096 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.18□□□□□ -0.14
NKX2-2O95096 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.18□□□□□ -0.14
NKX2-2O95096 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.18□□□□□ -0.14
NKX2-2O95096 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NKX2-2O95096 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.18□□□□□ -0.14
NKX2-2O95096 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NKX2-2O95096 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.18□□□□□ -0.14
NKX2-2O95096 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 LILRP1-201ENST00000444199 1370 ntBASIC14.18□□□□□ -0.14
NKX2-2O95096 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NKX2-2O95096 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NKX2-2O95096 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.18□□□□□ -0.14
NKX2-2O95096 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NKX2-2O95096 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.18□□□□□ -0.14
NKX2-2O95096 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NKX2-2O95096 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.18□□□□□ -0.14
NKX2-2O95096 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
NKX2-2O95096 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.17□□□□□ -0.14
NKX2-2O95096 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NKX2-2O95096 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NKX2-2O95096 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NKX2-2O95096 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NKX2-2O95096 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX2-2O95096 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
NKX2-2O95096 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX2-2O95096 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX2-2O95096 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.17□□□□□ -0.14
NKX2-2O95096 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX2-2O95096 HLA-K-203ENST00000430151 1046 ntBASIC14.17□□□□□ -0.14
NKX2-2O95096 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.17□□□□□ -0.14
NKX2-2O95096 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX2-2O95096 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.17□□□□□ -0.14
NKX2-2O95096 ELK1P1-201ENST00000485699 580 ntBASIC14.17□□□□□ -0.14
NKX2-2O95096 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.17□□□□□ -0.14
NKX2-2O95096 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.17□□□□□ -0.14
NKX2-2O95096 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.17□□□□□ -0.14
NKX2-2O95096 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.17□□□□□ -0.14
NKX2-2O95096 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.17□□□□□ -0.14
NKX2-2O95096 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.17□□□□□ -0.14
NKX2-2O95096 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.17□□□□□ -0.14
NKX2-2O95096 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.17□□□□□ -0.14
NKX2-2O95096 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms