Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.67■□□□□ 0.1
RIPK2O43353 SPDYE10P-202ENST00000612005 668 ntBASIC15.67■□□□□ 0.1
RIPK2O43353 SPDYE8P-202ENST00000612377 668 ntBASIC15.67■□□□□ 0.1
RIPK2O43353 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.67■□□□□ 0.1
RIPK2O43353 AC084121.4-201ENST00000641598 221 ntBASIC15.67■□□□□ 0.1
RIPK2O43353 AF228730.8-201ENST00000642140 221 ntBASIC15.67■□□□□ 0.1
RIPK2O43353 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RIPK2O43353 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.67■□□□□ 0.1
RIPK2O43353 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
RIPK2O43353 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.67■□□□□ 0.1
RIPK2O43353 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RIPK2O43353 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RIPK2O43353 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.67■□□□□ 0.1
RIPK2O43353 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RIPK2O43353 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPK2O43353 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RIPK2O43353 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RIPK2O43353 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RIPK2O43353 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RIPK2O43353 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.66■□□□□ 0.1
RIPK2O43353 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.66■□□□□ 0.1
RIPK2O43353 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.66■□□□□ 0.1
RIPK2O43353 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.66■□□□□ 0.1
RIPK2O43353 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.66■□□□□ 0.1
RIPK2O43353 SPDYE17-201ENST00000412399 783 ntBASIC15.66■□□□□ 0.1
RIPK2O43353 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.66■□□□□ 0.1
RIPK2O43353 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
RIPK2O43353 AL662844.1-201ENST00000546340 181 ntBASIC15.66■□□□□ 0.1
RIPK2O43353 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.66■□□□□ 0.1
RIPK2O43353 AC026120.1-201ENST00000611536 926 ntBASIC15.66■□□□□ 0.1
RIPK2O43353 AL645728.2-202ENST00000641679 227 ntBASIC15.66■□□□□ 0.1
RIPK2O43353 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RIPK2O43353 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RIPK2O43353 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPK2O43353 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.66■□□□□ 0.1
RIPK2O43353 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RIPK2O43353 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.65■□□□□ 0.1
RIPK2O43353 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
RIPK2O43353 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.65■□□□□ 0.1
RIPK2O43353 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RIPK2O43353 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.65■□□□□ 0.1
RIPK2O43353 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.65■□□□□ 0.1
RIPK2O43353 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.65■□□□□ 0.1
RIPK2O43353 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.65■□□□□ 0.1
RIPK2O43353 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RIPK2O43353 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RIPK2O43353 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.65■□□□□ 0.1
RIPK2O43353 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.65■□□□□ 0.1
RIPK2O43353 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.65■□□□□ 0.1
RIPK2O43353 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.65■□□□□ 0.1
RIPK2O43353 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.65■□□□□ 0.1
RIPK2O43353 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms