Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 MRPL3P1-201ENST00000400109 1033 ntBASIC10.6□□□□□ -0.71
NDUFA1O15239 RPL5P21-201ENST00000404620 815 ntBASIC10.6□□□□□ -0.71
NDUFA1O15239 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC10.6□□□□□ -0.71
NDUFA1O15239 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC10.6□□□□□ -0.71
NDUFA1O15239 AC074386.1-202ENST00000463561 864 ntBASIC10.6□□□□□ -0.71
NDUFA1O15239 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC10.6□□□□□ -0.71
NDUFA1O15239 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC10.6□□□□□ -0.71
NDUFA1O15239 AC098859.1-201ENST00000502915 1238 ntBASIC10.6□□□□□ -0.71
NDUFA1O15239 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC10.6□□□□□ -0.71
NDUFA1O15239 AC105233.2-201ENST00000523697 349 ntBASIC10.6□□□□□ -0.71
NDUFA1O15239 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC10.6□□□□□ -0.71
NDUFA1O15239 AF228730.5-201ENST00000530288 346 ntBASIC10.6□□□□□ -0.71
NDUFA1O15239 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC10.6□□□□□ -0.71
NDUFA1O15239 AC018845.2-201ENST00000568326 409 ntBASIC10.6□□□□□ -0.71
NDUFA1O15239 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC10.6□□□□□ -0.71
NDUFA1O15239 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 AL928921.2-201ENST00000641325 2442 ntBASIC10.6□□□□□ -0.71
NDUFA1O15239 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
NDUFA1O15239 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC10.6□□□□□ -0.71
NDUFA1O15239 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
NDUFA1O15239 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
NDUFA1O15239 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC10.6□□□□□ -0.71
NDUFA1O15239 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC10.6□□□□□ -0.71
NDUFA1O15239 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC10.6□□□□□ -0.71
NDUFA1O15239 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
NDUFA1O15239 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
NDUFA1O15239 AC015656.1-201ENST00000624209 3578 ntBASIC10.6□□□□□ -0.71
NDUFA1O15239 NARF-206ENST00000457415 1668 ntTSL 5 BASIC10.6□□□□□ -0.71
NDUFA1O15239 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC10.59□□□□□ -0.71
NDUFA1O15239 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC10.59□□□□□ -0.71
NDUFA1O15239 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
NDUFA1O15239 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC10.59□□□□□ -0.71
NDUFA1O15239 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
NDUFA1O15239 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
NDUFA1O15239 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC10.59□□□□□ -0.71
NDUFA1O15239 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
NDUFA1O15239 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC10.59□□□□□ -0.71
NDUFA1O15239 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 MBLAC2-202ENST00000514906 1936 ntBASIC10.59□□□□□ -0.71
NDUFA1O15239 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
NDUFA1O15239 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC10.59□□□□□ -0.71
NDUFA1O15239 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
NDUFA1O15239 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC10.59□□□□□ -0.71
NDUFA1O15239 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC10.59□□□□□ -0.71
NDUFA1O15239 RNA5SP416-201ENST00000516838 111 ntBASIC10.59□□□□□ -0.71
NDUFA1O15239 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
NDUFA1O15239 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC10.59□□□□□ -0.71
NDUFA1O15239 KRT126P-201ENST00000549467 1181 ntBASIC10.59□□□□□ -0.71
NDUFA1O15239 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 PDPK2P-202ENST00000562415 1191 ntBASIC10.59□□□□□ -0.71
NDUFA1O15239 AC145285.3-201ENST00000564603 959 ntBASIC10.59□□□□□ -0.71
NDUFA1O15239 RARRES2P8-201ENST00000566335 367 ntBASIC10.59□□□□□ -0.71
NDUFA1O15239 PAM16-215ENST00000577031 548 ntTSL 4 BASIC10.59□□□□□ -0.71
NDUFA1O15239 SLC25A6P4-201ENST00000586535 553 ntBASIC10.59□□□□□ -0.71
NDUFA1O15239 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC10.59□□□□□ -0.71
NDUFA1O15239 AC011467.4-201ENST00000594891 528 ntBASIC10.59□□□□□ -0.71
NDUFA1O15239 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
NDUFA1O15239 CAND2-206ENST00000626378 333 ntTSL 5 BASIC10.59□□□□□ -0.71
NDUFA1O15239 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC10.59□□□□□ -0.71
NDUFA1O15239 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC10.59□□□□□ -0.71
NDUFA1O15239 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms