Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 HLF-202ENST00000430986 1385 ntTSL 2 BASIC25.6■■□□□ 1.69
CUX2O14529 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC25.6■■□□□ 1.69
CUX2O14529 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CUX2O14529 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
CUX2O14529 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC25.6■■□□□ 1.69
CUX2O14529 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
CUX2O14529 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CUX2O14529 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CUX2O14529 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC25.6■■□□□ 1.69
CUX2O14529 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CUX2O14529 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CUX2O14529 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
CUX2O14529 AC106827.1-201ENST00000366454 431 ntBASIC25.6■■□□□ 1.69
CUX2O14529 OR51A9P-201ENST00000422578 911 ntBASIC25.6■■□□□ 1.69
CUX2O14529 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
CUX2O14529 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CUX2O14529 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC25.6■■□□□ 1.69
CUX2O14529 AC004066.1-201ENST00000502488 802 ntBASIC25.6■■□□□ 1.69
CUX2O14529 RNA5SP417-201ENST00000516459 108 ntBASIC25.6■■□□□ 1.69
CUX2O14529 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC25.6■■□□□ 1.69
CUX2O14529 MIR3188-201ENST00000583494 85 ntBASIC25.6■■□□□ 1.69
CUX2O14529 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC25.6■■□□□ 1.69
CUX2O14529 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC25.6■■□□□ 1.69
CUX2O14529 AC080013.5-201ENST00000607044 679 ntBASIC25.6■■□□□ 1.69
CUX2O14529 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CUX2O14529 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CUX2O14529 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC25.59■■□□□ 1.69
CUX2O14529 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC25.59■■□□□ 1.69
CUX2O14529 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
CUX2O14529 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CUX2O14529 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CUX2O14529 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CUX2O14529 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CUX2O14529 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CUX2O14529 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CUX2O14529 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CUX2O14529 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC25.59■■□□□ 1.69
CUX2O14529 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CUX2O14529 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC25.59■■□□□ 1.69
CUX2O14529 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
CUX2O14529 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC25.59■■□□□ 1.69
CUX2O14529 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CUX2O14529 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC25.59■■□□□ 1.69
CUX2O14529 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CUX2O14529 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
CUX2O14529 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CUX2O14529 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CUX2O14529 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
CUX2O14529 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
CUX2O14529 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CUX2O14529 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CUX2O14529 AC018695.7-201ENST00000624587 2492 ntBASIC25.58■■□□□ 1.69
CUX2O14529 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC25.58■■□□□ 1.69
CUX2O14529 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC25.58■■□□□ 1.69
CUX2O14529 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
CUX2O14529 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC25.58■■□□□ 1.69
CUX2O14529 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CUX2O14529 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CUX2O14529 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CUX2O14529 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC25.58■■□□□ 1.69
CUX2O14529 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CUX2O14529 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
CUX2O14529 OLA1P2-201ENST00000395519 1264 ntBASIC25.58■■□□□ 1.69
CUX2O14529 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC25.58■■□□□ 1.69
CUX2O14529 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CUX2O14529 AL512306.1-201ENST00000432698 848 ntBASIC25.58■■□□□ 1.69
CUX2O14529 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC25.58■■□□□ 1.69
CUX2O14529 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC25.58■■□□□ 1.69
CUX2O14529 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC25.58■■□□□ 1.69
CUX2O14529 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
CUX2O14529 USB1-205ENST00000561743 1135 ntTSL 3 BASIC25.58■■□□□ 1.69
CUX2O14529 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CUX2O14529 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC25.58■■□□□ 1.69
CUX2O14529 FKBP4P6-201ENST00000457486 1332 ntBASIC25.58■■□□□ 1.69
CUX2O14529 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.68
CUX2O14529 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
CUX2O14529 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.68
CUX2O14529 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
CUX2O14529 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CUX2O14529 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC25.57■■□□□ 1.68
CUX2O14529 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CUX2O14529 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CUX2O14529 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC25.57■■□□□ 1.68
CUX2O14529 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CUX2O14529 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CUX2O14529 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CUX2O14529 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CUX2O14529 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
CUX2O14529 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
CUX2O14529 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CUX2O14529 CTBP2P8-201ENST00000422584 1330 ntBASIC25.57■■□□□ 1.68
CUX2O14529 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC25.57■■□□□ 1.68
CUX2O14529 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC25.57■■□□□ 1.68
CUX2O14529 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CUX2O14529 DUX4L47-201ENST00000566374 394 ntBASIC25.57■■□□□ 1.68
CUX2O14529 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CUX2O14529 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC25.57■■□□□ 1.68
CUX2O14529 PHF23-213ENST00000613632 850 ntTSL 5 BASIC25.57■■□□□ 1.68
CUX2O14529 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CUX2O14529 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms