Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 AMT-221ENST00000538581 2038 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01546A6NGU7 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.67
LINC01546A6NGU7 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 RNA5SP410-201ENST00000516285 106 ntBASIC10.83□□□□□ -0.68
LINC01546A6NGU7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 AC096734.2-201ENST00000562054 433 ntBASIC10.83□□□□□ -0.68
LINC01546A6NGU7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 DBP-204ENST00000599385 709 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 WARS-203ENST00000358655 2466 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01546A6NGU7 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01546A6NGU7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms